Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq688 170 1e-37 seq3626 122 5e-23 seq2492 109 3e-19 >seq688 Length=109112 Score = 170 bits (188), Expect = 1e-37 Identities = 205/279 (73%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 47087 CCCGCCCATCCTCAATATTCATCTGAAGCTGCTCGTTTGAACACTTTTAAAGATTGGCCT 47146 ||||| || || | |||| |||| |||||||| ||| | || ||| ||||||||| Sbjct 9637 CCCGCTCACCCCCGATATGCATCCGAAGCTGCCCGTCTCCGTACATTTGTCGATTGGCCT 9578 Query 47147 CGTGGTTTGCGTCAGAGACCAAAAGAGTTAGCGGACGCGGGCTTCTTTTATACTGGTGAA 47206 || || |||| || | || | ||| |||| || || || ||||| || |||||| || Sbjct 9577 CGCAGTATGCGACAAAAGCCTGAGGAGCTAGCCGAAGCTGGTTTCTTCTACACTGGTCAA 9518 Query 47207 GGTGATAAAACGAAGTGTTATTATTGTGATGGTGGTCTGAGAGATTGGAACGAAGAAGAT 47266 || || |||||||| || | || ||||| |||||| ||| || ||| | | || ||| Sbjct 9517 GGAGACAAAACGAAATGCTTTTTCTGTGACGGTGGTTTGAAGGACTGGGAAAATGACGAT 9458 Query 47267 ATACCTTGGGAGGAGCACGCTCGTTGGTTTGATCGTTGTGTCTACGTTAAATTGGTAAAA 47326 || || |||||| | || || |||||||| ||||| |||| |||||| || | || ||| Sbjct 9457 ATTCCCTGGGAGCAACATGCACGTTGGTTCGATCGATGTGCCTACGTCCAACTTGTCAAA 9398 Query 47327 GGAGAAGATTTTATTCAAAGAGTTAAATCGGAAGCGTGT 47365 ||| ||| | | | |||| |||| ||||||||||||| Sbjct 9397 GGACGAGAGTATGTACAAAAGGTTATATCGGAAGCGTGT 9359 >seq3626 Length=201135 Score = 122 bits (134), Expect = 5e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| ||||| || ||||| || | |||| ||||||||||||||||| || || Sbjct 60204 GCCACCTCGGAGACGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTCAGA 60145 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| |||||| | ||||| ||||| || || ||||| || | ||||||||||| || || Sbjct 60144 AAGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGG 60085 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | || |||||||| ||| ||| | ||| || | |||||||||| || | Sbjct 60084 GATGCCTTCCTTGTCCTGGAT-TTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAA 60026 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | || || || || || || | || || ||||| |||||||| Sbjct 60025 CTTCTAATGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| ||||||| || | || |||||| ||| ||||||||||| || || || Sbjct 59747 CCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59688 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||||| | ||||| | |||||| || ||||| || | ||||||||||| || || Sbjct 59687 AGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59628 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| ||| | ||| || | |||||||||| || || Sbjct 59627 ATGCCTTCCTTGTCCTGGAT-TTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAAC 59569 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || || || | || || ||||| |||||||| Sbjct 59568 TTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| ||||| | || | || |||||| ||| ||||||||||| || || || Sbjct 59975 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59916 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||||| | ||||| |||||||| || ||||| || | ||||||||||| || || Sbjct 59915 AGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59856 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| ||| | ||| || | |||||||||| || || Sbjct 59855 ATGCCTTCCTTGTCCTGGAT-TTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAAC 59797 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || || || | || || ||||| |||||||| Sbjct 59796 TTCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59749 Score = 109 bits (120), Expect = 3e-19 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| ||||| | || | || |||||| ||| ||||||||||| || || ||| Sbjct 59519 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAA 59460 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| || ||||| || ||||| || | || || |||||||| || Sbjct 59459 AGGGTACGTCCGTCTTCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGGG 59400 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCT--TCGCTCTCC 34656 | || || |||||| ||| ||| | || ||| | || || ||| | ||||| Sbjct 59399 ATGCCTTCTTTGTCTTGGAT-TTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCT-- 59343 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | ||| ||||| ||||| || | ||||| |||||||| ||||| Sbjct 59342 ACTTCTAAGGTAATCGTCTTACCTGTGAGAGTTTTAACAAAAATTTGCAT 59293 Score = 105 bits (116), Expect = 4e-18 Identities = 168/234 (72%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 34480 CCGCCTC-TAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 || |||| |||| || || ||||| || || || |||||||||||||| ||||| || Sbjct 59291 CCACCTCGTAAG-CGTAATACCAAGTGAAGCGTAGATTCCTTTTGAATGTTGTAATCAGA 59233 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||||| ||| | |||||||| ||||| || || || || | ||||| || || || || Sbjct 59232 GAGTGTGCGCCCATCTTCAAGCTGTTTCCCTGCGAAGATAAGTCGCTGCTGATCGGGAGG 59173 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTG-TTTTAACGATAAAATTGTGTCTTCGCT--CTC 34655 | || || ||||| ||| ||| | ||||| | |||||| || || | ||| Sbjct 59172 GATACCTTCTTTGTC-CTGAATTTTAGCTTTTACATTTTCAATTGTATC--CGATGGCTC 59116 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || |||| |||||| ||||| || || | || ||||| || |||||||| || Sbjct 59115 AACCTCCAAGGTTATGGTTTTTCCAGTGAGTGTCTTCACGAATATCTGCATTTT 59062 >seq2492 Length=83244 Score = 109 bits (120), Expect = 3e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | || ||||||||||| ||| || ||||| || || || || || Sbjct 41686 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAG 41745 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | |||||||| || ||||| ||||| || | | ||| ||||| ||||| Sbjct 41746 AGTGTGCGACCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGCGGG 41805 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | ||||| |||||| ||| || |||| | ||| |||||| || || Sbjct 41806 ATACCCTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATAGTGTCTGAAGGTTCTACC 41865 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || | ||| || ||||| ||||| | || || ||||||||||||||||| Sbjct 41866 TCTAGGGTAATAGTTTTGCCGGTGAGGGTCTTTACAAAAATCTGCATGTT 41915 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | || ||||||||||| ||| || ||||| || || || ||||| Sbjct 41002 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAG 41061 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | |||||||| || || |||||||| || | | ||| ||||| || || Sbjct 41062 AGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 41121 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| |||||| ||| ||| | ||||| | ||| |||||| ||| || Sbjct 41122 ATACCCTCTTTGTCTTGGAT-TTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAAC 41180 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || ||||| || || || || || || ||||||||||| Sbjct 41181 TTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 41228 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | || ||||||||||| ||| || || || || || || || || Sbjct 41458 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGATATTGTAGTCCGAG 41517 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | |||||||| || || |||||||| || | | ||| ||||| || || Sbjct 41518 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 41577 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| |||||| ||| ||| | |||||| | ||| |||||| ||| || Sbjct 41578 ATACCCTCTTTGTCT-TGAATTTTGGCTTTAACATTTTCAATGGTGTCTGATGGCTCAAC 41636 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || ||||| || ||||| || || || ||||||||||| Sbjct 41637 TTCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTGACGAAAATCTGCAT 41684 Score = 105 bits (116), Expect = 4e-18 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | || ||||||||||| ||| || ||||| || || || || || Sbjct 40774 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAG 40833 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | |||||||| || || |||||||| || | | ||| ||||| || || Sbjct 40834 AGTGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40893 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCT--CTCC 34656 | ||||| |||||| ||| ||| | ||||| | ||| ||||| || | ||| Sbjct 40894 ATACCCTCTTTGTCTTGGAT-TTTGGCCTTAACATTTTCAATAGTGTC--CGATGGCTCA 40950 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | || || ||||| || ||||| || || || ||||||||||| Sbjct 40951 ACTTCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTTACGAAAATCTGCAT 41000 Score = 105 bits (116), Expect = 4e-18 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | || ||||||||||| ||| || ||||| || || || || || Sbjct 41230 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAG 41289 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | |||||||| || || |||||||| || | | ||| ||||| || || Sbjct 41290 AGTGTACGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 41349 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCT--CTCC 34656 | ||||| |||||| ||| ||| | ||||| | ||| ||||| || | ||| Sbjct 41350 ATACCCTCTTTGTCT-TGAATTTTGGCCTTAACATTTTCAATAGTGTC--CGATGGCTCA 41406 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | || || ||||| || || || || || |||||||||||||| Sbjct 41407 ACTTCAAGAGTAATGGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | || ||||||||||| ||| || ||||| || || || || || Sbjct 40546 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAG 40605 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | |||||||| || || |||||||| || | | ||| ||||| || || Sbjct 40606 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40665 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| |||||| ||| ||| | ||||| | ||| |||||| ||| || Sbjct 40666 ATACCCTCTTTGTCTTGGAT-TTTGGCCTTAACATTTTCAATAGTGTCTGAAGGCTCAAC 40724 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || ||||| || || || || || || ||||||||||| Sbjct 40725 TTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 40772 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | || ||||||||||| ||| || || || || || || || || Sbjct 40318 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGATATTGTAGTCCGAG 40377 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | |||||||| || || |||||||| || | | ||| ||||| || || Sbjct 40378 AGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40437 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| |||||| ||| ||| | ||||| | ||| |||||| ||| || Sbjct 40438 ATACCCTCTTTGTCTTGGAT-TTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAAC 40496 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || ||||| || || || || || || ||||||||||| Sbjct 40497 TTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTTACGAAAATCTGCAT 40544 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 || |||||||||||| || ||||| || || || || || ||||| || | |||||| Sbjct 40108 ACTAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCCGATAGTGTGCGGCCATCTTCA 40167 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || |||||||| || | | ||| ||||| || || | ||||| |||||| | Sbjct 40168 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGG 40227 Query 34618 ATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 || ||| | ||||| | || |||||| ||| ||||| | || || ||||| Sbjct 40228 AT-TTTAGCCTTAACATTTTCTATGGTGTCTGATGGCTCAACTTCAAGTGTGATGGTTTT 40286 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| || || || ||||| ||||| Sbjct 40287 GCCAGTTAAGGTCTTGACGAAAATTTGCAT 40316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314574792279647