Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3626 179 9e-40 seq2492 132 1e-25 seq4182 104 5e-17 >seq3626 Length=201135 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||||||||||||||||||||| ||||| || || | ||||| | |||||| Sbjct 59960 AGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCT 59901 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| || || || || ||||| || || |||||||| ||||| | |||||||||||| Sbjct 59900 TCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCC 59841 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || ||| || || || || ||||| || |||||| || | ||| || ||| Sbjct 59840 TGGATTTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAATAGTC 59781 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || |||||||| ||||| | |||||| Sbjct 59780 TTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59749 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||||||||||||||||||||| ||||| || || | ||||| | |||||| Sbjct 59732 AGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCT 59673 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| || || || || ||||| || || |||||||| ||||| | |||||||||||| Sbjct 59672 TCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCC 59613 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || ||| || || || || ||||| || |||||| || | ||| || ||| Sbjct 59612 TGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAATGGTC 59553 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || |||||||| ||||| | |||||| Sbjct 59552 TTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | |||||| || ||||| |||||||| || | |||||| | ||||||||||| || Sbjct 60180 GTGCAAAGTGGATTCCTTTTGAATGTTATAGTCAGAAAGGGTTCGCCCATCTTCCAGTTG 60121 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || |||||||| || |||||||| ||||| | ||||||||||||||||| || Sbjct 60120 CTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATTTT 60061 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || || || || ||||| || |||||| || | || || |||||||| || Sbjct 60060 GGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCTAATGTAATGGTCTTTCCAGT 60001 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| | |||||| Sbjct 60000 AAGAGTCTTGACAAAGATCTGCAT 59977 Score = 163 bits (180), Expect = 7e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||||||||||||||||||||| ||||| || || | |||||| | ||| ||| Sbjct 59504 AGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCT 59445 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || || || || ||||| ||||| ||||| | ||||| ||||| Sbjct 59444 TCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGGGATGCCTTCTTTGTCT 59385 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || ||||||||||| || || || || || || | || |||||| Sbjct 59384 TGGATTTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCTACTTCTAAGGTAATCGTC 59325 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || |||||||| || ||||| | |||||| Sbjct 59324 TTACCTGTGAGAGTTTTAACAAAAATTTGCATT 59292 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| || || || ||||| ||||| ||||| | || || | |||||||| ||||| Sbjct 59268 GTGAAGCGTAGATTCCTTTTGAATGTTGTAATCAGAGAGTGTGCGCCCATCTTCAAGCTG 59209 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || |||||||||||||| || || || || ||||| | ||||| |||||||| || || Sbjct 59208 TTTCCCTGCGAAGATAAGTCGCTGCTGATCGGGAGGGATACCTTCTTTGTCCTGAATTTT 59149 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || ||||| || || || || |||||||| | || || || ||||| || Sbjct 59148 AGCTTTTACATTTTCAATTGTATCCGATGGCTCAACCTCCAAGGTTATGGTTTTTCCAGT 59089 Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117 ||| ||||| || || | ||||||||| Sbjct 59088 GAGTGTCTTCACGAATATCTGCATTTT 59062 >seq2492 Length=83244 Score = 132 bits (146), Expect = 1e-25 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || || ||||| ||||||||||| || || || | || || | || Sbjct 41697 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAGAGTGTGCGACC 41756 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| |||||||| || || |||||||| | || ||||| || || | || || || Sbjct 41757 ATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGCGGGATACCCTCTTT 41816 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || || || ||||| || ||||| || ||| ||||| || || || Sbjct 41817 GTCTTGGATTTTAGCCTTTACATTTTCAATAGTGTCTGAAGGTTCTACCTCTAGGGTAAT 41876 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATGG 211121 || || || ||||| ||||||||||| | |||||| || ||| Sbjct 41877 AGTTTTGCCGGTGAGGGTCTTTACAAAAATCTGCATGTTCTGG 41919 Score = 120 bits (132), Expect = 7e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || |||||||| ||||||||||| || || |||| || || | || Sbjct 40101 TCTCAGTACTAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCCGATAGTGTGCGGCC 40160 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| ||||||||||| || ||||| || | || ||||| || || | || || || Sbjct 40161 ATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 40220 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || || || ||||| |||||||| || ||||| || || ||||| Sbjct 40221 GTCTTGGATTTTAGCCTTAACATTTTCTATGGTGTCTGATGGCTCAACTTCAAGTGTGAT 40280 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | ||||| || || | ||||| Sbjct 40281 GGTTTTGCCAGTTAAGGTCTTGACGAAAATTTGCAT 40316 Score = 120 bits (132), Expect = 7e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || || ||||| ||||| ||||| || || |||| || || | || Sbjct 40329 TCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGATATTGTAGTCCGAGAGTGTGCGACC 40388 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| ||||||||||| || ||||| || | || ||||| || || | || || || Sbjct 40389 ATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 40448 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || || || ||||| || ||||| || ||||| || |||||||| Sbjct 40449 GTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAACTTCAAGAGTGAT 40508 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | |||||||| || | |||||| Sbjct 40509 GGTTTTGCCAGTCAAGGTCTTTACGAAAATCTGCAT 40544 Score = 120 bits (132), Expect = 7e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || || ||||| ||||||||||| || || |||| || || | || Sbjct 40557 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAGAGTGTGCGGCC 40616 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| ||||||||||| || ||||| || | || ||||| || || | || || || Sbjct 40617 ATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 40676 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || || || ||||| || ||||| || ||||| || |||||||| Sbjct 40677 GTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGAAGGCTCAACTTCAAGAGTGAT 40736 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | ||||| || || | |||||| Sbjct 40737 GGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 40772 Score = 116 bits (128), Expect = 9e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || || ||||| ||||| ||||| || || |||| || || | || Sbjct 41469 TCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGATATTGTAGTCCGAGAGTGTGCGGCC 41528 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| ||||||||||| || ||||| || | || ||||| || || | || || || Sbjct 41529 ATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 41588 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || || || ||| || ||||| |||||||| || ||||| || || ||||| Sbjct 41589 GTCTTGAATTTTGGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCAAGTGTGAT 41648 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || || | ||||| || || | ||||||| Sbjct 41649 GGTTTTGCCAGTTAAGGTCTTGACGAAAATCTGCATT 41685 Score = 114 bits (126), Expect = 3e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || || ||||| ||||||||||| || || |||| || || | || Sbjct 40785 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAGAGTGTGCGACC 40844 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| |||||||| || || ||||| || | || ||||| || || | || || || Sbjct 40845 ATCTTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 40904 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || || || ||||| || ||||| || ||||| || || ||||| Sbjct 40905 GTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAACTTCAAGTGTGAT 40964 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | |||||||| || | |||||| Sbjct 40965 GGTTTTGCCAGTTAAGGTCTTTACGAAAATCTGCAT 41000 Score = 114 bits (126), Expect = 3e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || || ||||| ||||||||||| || || || | || || | || Sbjct 41013 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTGCGACC 41072 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| ||||||||||| || ||||| || | || ||||| || || | || || || Sbjct 41073 ATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 41132 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || || || ||||| || ||||| || ||||| || |||||||| Sbjct 41133 GTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAACTTCAAGAGTGAT 41192 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | ||||| || || | |||||| Sbjct 41193 GGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 41228 Score = 111 bits (122), Expect = 4e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || || ||||| ||||||||||| || || || | || || | || Sbjct 41241 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAGAGTGTACGACC 41300 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| ||||||||||| || ||||| || | || ||||| || || | || || || Sbjct 41301 ATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 41360 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || || || || || ||||| || ||||| || ||||| || ||||| || Sbjct 41361 GTCTTGAATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAACTTCAAGAGTAAT 41420 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | ||||| ||||| | |||||| Sbjct 41421 GGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456 >seq4182 Length=188933 Score = 104 bits (114), Expect = 5e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 ||||| || | || ||||| || || || || || || | | || | ||||||||| Sbjct 74290 ACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTCGGATAATGTGCGGCCATCTTCC 74349 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 ||||| || || || ||||| | ||||| || || || |||| ||||| || || || Sbjct 74350 AGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGGTGGAATACCTTCTTTATCTTGA 74409 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 || || ||| || ||||| || || || || || |||||||| ||||| || || Sbjct 74410 ATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCCTCCACCTCGAGGGTGATGGTTTTC 74469 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || ||||| || | ||||||| Sbjct 74470 CCCGTAAGGGTTTTTACGAATATCTGCATT 74499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158552602863035