Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2492 134 9e-27 seq3626 129 4e-25 >seq2492 Length=83244 Score = 134 bits (148), Expect = 9e-27 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || || ||||| |||||||| |||||||| | | Sbjct 40772 ATGCAGATTTTCGTCAAGACCTTGACTGGCAAAACCATCACTCTTGAAGTTGAGCCTTCA 40713 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||||| | |||| | |||| | |||||||| ||| | || ||||| || Sbjct 40712 GACACTATTGAAAATGTTAAGGCCAAAA-TCCAAGACAAAGAGGGTATCCCACCAGACCA 40654 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||||||||| || || ||||| | ||||| | || ||||| Sbjct 40653 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCGGACTACAA 40594 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| |||||| | ||||| || | || ||| |||| || Sbjct 40593 TATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 40546 Score = 134 bits (148), Expect = 9e-27 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || || ||||| |||||||| |||||||| | | Sbjct 41228 ATGCAGATTTTCGTCAAGACCTTGACTGGCAAAACCATCACTCTTGAAGTTGAGCCATCA 41169 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||||| | |||| | |||| | |||||||| ||| | || ||||| || Sbjct 41168 GACACTATTGAAAATGTTAAGGCCAAAA-TCCAAGACAAAGAGGGTATCCCACCAGACCA 41110 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||||||||| || || ||||| | ||||| | || ||||| Sbjct 41109 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAA 41050 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| |||||| | ||||| || | || ||| |||| || Sbjct 41049 TATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 41002 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || ||| | || || ||||| ||||| || |||||||| | | Sbjct 41685 AATGCAGATTTTCGTCAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATC 41626 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||||| | ||||| | |||| || |||||||| ||| | || ||||| | Sbjct 41625 AGACACCATTGAAAATGTTAAAGCCAAAA-TTCAAGACAAAGAGGGTATCCCACCAGACC 41567 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || ||||||||||| || || ||||| | ||||| | || |||| Sbjct 41566 AGCAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCGGACTACA 41507 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | || || ||||| |||||| | ||||| || | || ||| |||| || Sbjct 41506 ATATCCAGAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 41458 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || || ||||| |||||||| |||||||| | | Sbjct 40544 ATGCAGATTTTCGTAAAGACCTTGACTGGCAAAACCATCACTCTTGAAGTTGAGCCATCA 40485 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||||| | |||| | |||| | |||||||| ||| | || ||||| || Sbjct 40484 GACACTATTGAAAATGTTAAGGCCAAAA-TCCAAGACAAAGAGGGTATCCCACCAGACCA 40426 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||||||||| || || ||||| | ||||| | || ||||| Sbjct 40425 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCGGACTACAA 40366 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || ||||| |||||| | ||||| || | || ||| |||| || Sbjct 40365 TATCCAGAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 40318 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || || ||||| ||||| || |||||||| | || Sbjct 41000 ATGCAGATTTTCGTAAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATCG 40941 Query 23671 GACACTGTTG-AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| ||| |||| |||| | ||||| |||||||| ||| | || ||||| || Sbjct 40940 GACACTATTGAAAATGTTAAGGC-CAAAATCCAAGACAAAGAGGGTATCCCACCAGACCA 40882 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| || || || ||||| | ||||| | || ||||| Sbjct 40881 GCAGAGGCTCATCTTTGCCGGAAAGCAGCTTGAAGATGGTCGCACACTCTCGGACTACAA 40822 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| |||||| | ||||| || | || ||| |||| || Sbjct 40821 TATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 40774 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||| | || || ||||| || ||||| |||||||| | || Sbjct 41456 ATGCAGATTTTTGTCAAGACCTTGACTGGCAAAACCATTACTCTTGAAGTTGAGCCATCG 41397 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||||| | |||| | |||| || |||||||| ||| | || ||||| || Sbjct 41396 GACACTATTGAAAATGTTAAGGCCAAAA-TTCAAGACAAAGAGGGTATCCCACCAGACCA 41338 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||||||||| || || ||||| | || || | || ||||| Sbjct 41337 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGTACACTCTCTGACTACAA 41278 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| |||||| | ||||| || | || ||| |||| || Sbjct 41277 TATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 41230 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||| || || |||||||| || ||||| || || || || || || | Sbjct 41915 AACATGCAGATTTTTGTAAAGACCCTCACCGGCAAAACTATTACCCTAGAGGTAGAACCT 41856 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | |||||| |||||| |||| ||||| |||||||| ||| | |||||||| Sbjct 41855 TCAGACACTATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAGGGTATCCCGCCAGAC 41796 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||| | | || ||||| || || || || ||||| | ||||| | || ||| Sbjct 41795 CAGCAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGTCGCACACTCTCTGACTAC 41736 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || |||||||| |||||| | ||||| || | || ||| |||| ||| Sbjct 41735 AATATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGGA 41685 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || ||| | || || ||||| ||||| || |||||||| | | Sbjct 40316 ATGCAAATTTTCGTCAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATCA 40257 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | |||| | |||| | |||| | |||||||| ||| | || ||||| || Sbjct 40256 GACACCATAGAAAATGTTAAGGCTAAAA-TCCAAGACAAAGAGGGTATCCCACCAGACCA 40198 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||||||||| || || ||||| | ||||| || || ||||| Sbjct 40197 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTATCGGACTACAA 40138 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| ||||| | |||||||| | || ||| | || || Sbjct 40137 TATCCAAAAAGAATCCACTCTCCATTTAGTACTGAGATTGAGGGGTGG 40090 >seq3626 Length=201135 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| || || ||||| |||||||| || || | || ||||| | Sbjct 59062 AAAATGCAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAGCCA 59121 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || |||||| ||||| |||||| |||||||||||| | || || ||| Sbjct 59122 TCGGATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCCGAT 59181 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||||| | || || || || ||||| || ||||| | ||||| | |||||| Sbjct 59182 CAGCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCTCTGATTAC 59241 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||||| ||||| || || || | || || || ||| | || ||||| ||| Sbjct 59242 AACATTCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGGA 59292 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| || || || ||||| || || ||| | |||||||| | | Sbjct 59521 ATGCAGATCTTTGTTAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTTGAACCTTCA 59580 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||| | ||||| ||||| | || ||||| || Sbjct 59581 GACACAATTGAGAATGTCAAAGCCAAAA-TCCAGGACAAGGAAGGCATCCCTCCAGACCA 59639 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||| || |||||| ||||||| | || || | || ||||| Sbjct 59640 ACAGCGACTCATCTTTGCTGGAAAACAATTGGAAGATGGGCGAACCCTGTCTGACTACAA 59699 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| |||||||||||||| Sbjct 59700 CATTCAAAAAGAGTCCAC 59717 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || || || ||||| || || ||| | |||||||| | | Sbjct 59749 ATGCAGATCTTTGTCAAGACTCTTACTGGAAAGACTATTACTTTGGAAGTTGAACCTTCA 59808 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||| | ||||| ||||| | || ||||| || Sbjct 59809 GACACAATTGAGAATGTCAAAGCTAAAA-TCCAGGACAAGGAAGGCATCCCTCCAGACCA 59867 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||| || |||||||||||||| | || || | || ||||| Sbjct 59868 ACAGCGACTCATCTTTGCTGGAAAACAACTGGAAGATGGGCGAACCCTGTCTGACTACAA 59927 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| |||||||||||||| Sbjct 59928 CATTCAAAAAGAGTCCAC 59945 Score = 109 bits (120), Expect = 4e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| ||||| |||||||| ||||| || || ||||| || | ||||| || | | Sbjct 59292 AATGCAAATTTTTGTTAAAACTCTCACAGGTAAGACGATTACCTTAGAAGTAGAGCCATC 59351 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | |||| |||| ||||| ||||||||||| | || || || || Sbjct 59352 AGATACTATCGAAAACGTAAAGGCGAAAATCCAAGACAAAGAAGGCATCCCTCCGGACCA 59411 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || || | || ||||| || ||||| |||||||||| ||| || | || ||||| Sbjct 59412 GCAACGGCTCATTTTTGCTGGAAAACAGCTGGAAGACGGACGTACCCTTTCTGACTACAA 59471 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| |||||||||||||| Sbjct 59472 CATTCAAAAAGAGTCCAC 59489 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || || || ||||| || || || | |||||||| | | Sbjct 59977 ATGCAGATCTTTGTCAAGACTCTTACTGGAAAGACCATTACATTAGAAGTTGAACCTTCA 60036 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||| | ||||| ||||| | || ||||| || Sbjct 60037 GACACAATTGAGAATGTCAAAGCCAAAA-TCCAGGACAAGGAAGGCATCCCTCCAGACCA 60095 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||| || || ||||||||||| | || || | || || || Sbjct 60096 ACAGCGACTTATCTTTGCTGGAAAGCAACTGGAAGATGGGCGAACCCTTTCTGACTATAA 60155 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || ||||| || || || || ||| | | ||||| || Sbjct 60156 CATTCAAAAGGAATCCACTTTGCACTTGGTATTACGTCTCCGAGGTGG 60203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337843341422372