Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 297 2e-75
seq2867 93.3 3e-14
>seq4146
Length=100757
Score = 297 bits (328), Expect = 2e-75
Identities = 596/878 (68%), Gaps = 13/878 (1%)
Strand=Plus/Minus
Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200
|| || ||||| || |||||||| ||| | || || || || || || || || |
Sbjct 16622 GCTTATTTTGTGGAGTGGGGTGTTTACCCTAGAAAATTCCCAGTAGATAAGGTACCCATT 16563
Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260
|| ||| | | ||| | || ||||| ||||| || || |||||||| ||||| || |||
Sbjct 16562 CCAAATCTTACACATCTTCTTTACGGATTTATCCCCATCTGTGGCGGTGACGGAATTAAC 16503
Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320
||| | ||| || || ||||| | ||||||||| |||| ||| |||| ||
Sbjct 16502 GACAGTTTAAAAGAAATCGAAGGAAGTTTCCAAGCTTTGCAAAGATCTTGCAGCGGGCGA 16443
Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380
|| || |||||||| || || || ||| |||||| || | |||||||| || || ||
Sbjct 16442 GAGGACTTCAAAGTTTCTATCCATGACCCTTGGGCAGCTTTACAAAAACCACAGAAGGGT 16383
Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440
|| || | |||||||| || ||||||||||||||||||||| ||||| | |||
Sbjct 16382 TTGTCCTCCTGGAACGAACCTTACAAAGGCAACTTTGGACAACTGATGTCTTTGAAACAA 16323
Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACGTTGTCGGACCCGTTT 109500
|| | ||| | | || |||| || || || || || ||||| || | || || ||
Sbjct 16322 GCTAGACCTGATTTGAAGGTTCTTCCATCAATCGGAGGCTGGACACTGGCAGATCCATTC 16263
Query 109501 TATTTTATGCACGATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATTTTTA 109560
|| ||| | | ||| || ||||||| || || | ||| ||| || || |
Sbjct 16262 TACTTTTTTGATGATAAGGTAAAAAGAGATCGTTTTGTGGCATCAGTGAAAGACTTCCTC 16203
Query 109561 CAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAGGGT 109620
||| ||||||||||| || || || ||||||||||||||||| || || || || |||
Sbjct 16202 CAAACTTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTGGAAAAGGT 16143
Query 109621 GCCAATCCGAGTCTCGGCGACGCAACGCGCGACAGCAAAACGTACATTGCGTTGTTAAAA 109680
|| ||||| | ||||| | ||| ||| | || ||| | | | | |||
Sbjct 16142 GCTAATCCTAACCTCGGTGGACCAA---ATGACGGTGAAGTTTACGTCCAGCTTATGAAA 16086
Query 109681 GAGTTGCGCGCCATGTTGGACGACTT----GCAAACGGCCACCAACAAAACGTACGAATT 109736
||||| || | ||| || |||| || ||| | | | || ||| || ||| |
Sbjct 16085 GAGTTACGTGAAATGCTGAACGAGTTATCCGCAGA-GACTGGTAAGAAA---TATGAACT 16030
Query 109737 GACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTACGCGTCGGCGCA 109796
||| ||| ||||| || |||| |||||||| | || || || ||| | || ||
Sbjct 16029 GACATCCGCTATTAGTGCTGGTTGGGATAAAATCCAAGTAGTTGACTACAGGAAAGCTCA 15970
Query 109797 ACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTCAAA-CA 109855
|||||| |||| | || || ||||||| ||||| || ||||| || |||||||| |
Sbjct 15969 GCAATATATGGATCATATCTTCTTAATGAGTTACGACTTTAAAGGAGCGTGGTCAAATGA 15910
Query 109856 CGGACTTAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACGAATTGTACA 109915
| ||| || |||| || | ||||||| || | ||||||||||| ||| ||||
Sbjct 15909 CACTCTT-GGACATCAAACACCGTTGTACGCACCTGCATGGAATCCAAAGGAAACCTACA 15851
Query 109916 CGACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaaaaaTTATAA 109975
| || || | | || ||| | || || ||| ||| ||||| || ||||||
Sbjct 15850 CAACTGACTTTGGAGTTAAAAACCTCTTAGCCCAAGGAGTCAACCCTAAGAAGATTATAG 15791
Query 109976 TTGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCGTC 110013
|||| ||||||||||| || || || ||||| || |||
Sbjct 15790 TTGGTGTAGCGATGTATGGTCGTGGTTGGACTGGAGTC 15753
>seq2867
Length=333652
Score = 93.3 bits (102), Expect = 3e-14
Identities = 102/134 (76%), Gaps = 4/134 (3%)
Strand=Plus/Plus
Query 103377 GTTGCCCAAATCGCCAACGTGTCTGACGAGCGCGTCGGGCGCGCCGTGCG--TTTCGCCG 103434
|||||||| ||| || |||||||||||| ||||| || ||||||||| | | ||||
Sbjct 230855 GTTGCCCAGATCACCTACGTGTCTGACGGATGCGTCAGGGGCGCCGTGCTCCTGTTGCCG 230914
Query 103435 GTGGGATTAAAATGTTCGCCGGCCGACGTGCAGCCGTTGCTTGTGTCGCCAAACTCGTGC 103494
| ||||| || || | || ||||||||||||||||| | |||| |||||||| ||
Sbjct 230915 G--GGATTGAAGTGCGCCCCCGCCGACGTGCAGCCGTTTGTGTTGTCTCCAAACTCATGG 230972
Query 103495 ACGTGAAAACCGTG 103508
| ||| || || ||
Sbjct 230973 ATGTGGAACCCATG 230986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409459297965981
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |