Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq409 109 5e-19
>seq409
Length=488447
Score = 109 bits (120), Expect = 5e-19
Identities = 80/93 (86%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 5042 TAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAAT 5101
|||||| |||||||||||||||||||| || ||||| |||||||||||||| ||||||
Sbjct 76510 TAAATCCACTTCTTCAACAGTCCAAAAGGAAGCTTCGGCTTTTTTGTACATTTCCCAAAT 76569
Query 5102 ATCAGGATACTGAATCGGAAGTATGACAAATCT 5134
||| |||||||| || || | ||| ||||||||
Sbjct 76570 ATCTGGATACTGGATAGGGAATATAACAAATCT 76602
Score = 93.3 bits (102), Expect = 4e-14
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 4816 GAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCT 4875
|||| || ||||| |||| ||| ||||||||||| || | |||||| ||||| || |
Sbjct 76208 GAATGTATGTGTCAATTAATAGAGAGTACATTTCAGAGTGAACATTTTCCATAGCTATTT 76267
Query 4876 GAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTA 4935
| || || || ||| |||| || || || |||||||| || | |||| | || ||||
Sbjct 76268 GGAACCCATAGAAGAATCTGGCCTCAGTAACTTGAACCTCTTGTGAAAACCGCTCCACTA 76327
Query 4936 AGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATG 4984
||||| || || || || ||| || |||||||| || | ||| ||
Sbjct 76328 GATTTTCATTGACAATTCCATCAGATGCGGCAAAAAATGCTAGAACGTG 76376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426839544844547
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |