Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3626 167 6e-36 seq2492 138 3e-27 seq4182 131 4e-25 seq387 86.0 2e-11 >seq3626 Length=201135 Score = 167 bits (184), Expect = 6e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || |||||||||||||| || ||||| ||| | || || || ||||| Sbjct 59296 CAAATTTTTGTTAAAACTCTCACAGGTAAGACGATTACCTTAGAAGTAGAGCCATCAGAT 59355 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || || || || ||||||||||| |||||||||||||||||| Sbjct 59356 ACTATCGAAAACGTAAAGGCGAAAATCCAAGACAAAGAAGGCATCCCTCCGGACCAGCAA 59415 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || ||||||||||| ||||| ||| | || ||| | || || ||| | Sbjct 59416 CGGCTCATTTTTGCTGGAAAACAGCTGGAAGACGGACGTACCCTTTCTGACTACAACATT 59475 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 |||||||| || || || || |||||| Sbjct 59476 CAAAAAGAGTCCACTCTTCACCTTGTT 59502 Score = 156 bits (172), Expect = 1e-32 Identities = 164/214 (77%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || |||||||| || ||||| |||||||| || ||| | ||||| || Sbjct 59062 AAAATGC---AGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAG 59118 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || || || || || || ||| || ||||||||||||||||| |||||||| Sbjct 59119 CCATCGGATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCC 59178 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| |||||||||||||| || |||||||| |||||||| | || || | ||| Sbjct 59179 GATCAGCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCTCTGAT 59238 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 || ||| | ||||| ||||| || || || |||| Sbjct 59239 TACAACATTCAAAAGGAATCTACGCTTCA-CTTG 59271 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| || ||||| || || || | || || ||| |||||| Sbjct 59980 CAGATCTTTGTCAAGACTCTTACTGGAAAGACCATTACATTAGAAGTTGAACCTTCAGAC 60039 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| |||||| || || |||||||| ||||| |||||||| ||||| || Sbjct 60040 ACAATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCAACAG 60099 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||| || ||||| || || |||||||| | || ||| | || |||||| | Sbjct 60100 CGACTTATCTTTGCTGGAAAGCAACTGGAAGATGGGCGAACCCTTTCTGACTATAACATT 60159 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| ||||| || |||| |||| Sbjct 60160 CAAAAGGAATCCACTTTGCA-CTTG 60183 >seq2492 Length=83244 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || ||||| || ||||| || ||||| ||||| ||| |||||| Sbjct 41909 CAGATTTTTGTAAAGACCCTCACCGGCAAAACTATTACCCTAGAGGTAGAACCTTCAGAC 41850 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || || || |||||||| || ||||| || |||||||| Sbjct 41849 ACTATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAGGGTATCCCGCCAGACCAGCAG 41790 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| || || || ||||| |||||||| | || || | || || || || Sbjct 41789 AGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGTCGCACACTCTCTGACTACAATATC 41730 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| ||||| ||| | || ||||| | ||| Sbjct 41729 CAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGA 41691 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || || ||||| ||||| || || || || |||||| Sbjct 41681 CAGATTTTCGTCAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATCAGAC 41622 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| || ||||| |||||||| || ||||| || |||||||| Sbjct 41621 ACCATTGAAAATGTTAAAGCCAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAGCAG 41562 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| ||||| || ||||| |||||||| | || || | || || || || Sbjct 41561 AGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCGGACTACAATATC 41502 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || |||||||| ||||| ||| | || ||||| | ||| Sbjct 41501 CAGAAAGAATCCACACTCCATTTGGTACTGAGATTGAGA 41463 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || || ||||| ||||| || || || || |||||| Sbjct 40313 CAAATTTTCGTCAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATCAGAC 40254 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || || || || |||||||| || ||||| || |||||||| Sbjct 40253 ACCATAGAAAATGTTAAGGCTAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAGCAG 40194 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| ||||| || ||||| |||||||| | || || | || || || || Sbjct 40193 AGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTATCGGACTACAATATC 40134 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 ||||||||||| || || ||| | || ||||| Sbjct 40133 CAAAAAGAATCCACTCTCCATTTAGTACTGAGA 40101 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || || ||||| ||||| || || || || |||||| Sbjct 40769 CAGATTTTCGTCAAGACCTTGACTGGCAAAACCATCACTCTTGAAGTTGAGCCTTCAGAC 40710 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || || || |||||||| || ||||| || |||||||| Sbjct 40709 ACTATTGAAAATGTTAAGGCCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAGCAG 40650 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| ||||| || ||||| |||||||| | || || | || || || || Sbjct 40649 AGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCGGACTACAATATC 40590 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| ||||| ||| | || ||||| | ||| Sbjct 40589 CAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGA 40551 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || || ||||| ||||| || || || || || ||| Sbjct 40997 CAGATTTTCGTAAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATCGGAC 40938 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || || || |||||||| || ||||| || |||||||| Sbjct 40937 ACTATTGAAAATGTTAAGGCCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAGCAG 40878 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| |||||||| ||||| |||||||| | || || | || || || || Sbjct 40877 AGGCTCATCTTTGCCGGAAAGCAGCTTGAAGATGGTCGCACACTCTCGGACTACAATATC 40818 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| ||||| ||| | || ||||| | ||| Sbjct 40817 CAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGA 40779 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || || ||||| ||||| || || || || |||||| Sbjct 41225 CAGATTTTCGTCAAGACCTTGACTGGCAAAACCATCACTCTTGAAGTTGAGCCATCAGAC 41166 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || || || |||||||| || ||||| || |||||||| Sbjct 41165 ACTATTGAAAATGTTAAGGCCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAGCAG 41106 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| ||||| || ||||| |||||||| | || || | || || || || Sbjct 41105 AGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAATATC 41046 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| ||||| ||| | || ||||| | ||| Sbjct 41045 CAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGA 41007 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || | || || ||||| || || || || || || || ||| Sbjct 41453 CAGATTTTTGTCAAGACCTTGACTGGCAAAACCATTACTCTTGAAGTTGAGCCATCGGAC 41394 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || ||||| |||||||| || ||||| || |||||||| Sbjct 41393 ACTATTGAAAATGTTAAGGCCAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAGCAG 41334 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| ||||| || ||||| |||||||| | || || | || || || || Sbjct 41333 AGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGTACACTCTCTGACTACAATATC 41274 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| ||||| ||| | || ||||| | ||| Sbjct 41273 CAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGA 41235 >seq4182 Length=188933 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || || ||||| ||||||||||||||||| || || Sbjct 74495 CAGATATTCGTAAAAACCCTTACGGGGAAAACCATCACCCTCGAGGTGGAGGCTTCCGAT 74436 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||| || |||||||| || || ||||| |||||| Sbjct 74435 ACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCGGATCAGCAA 74376 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || |||||||| |||||||| | || | |||| || || | Sbjct 74375 CGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACATTATCCGACTACAATATT 74316 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135 || || || || || | |||||||| ||||| Sbjct 74315 CAGAAGGAGTCTACGTTACATCTTGTGTTGAG 74284 >seq387 Length=840652 Score = 86.0 bits (94), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 3/131 (2%) Strand=Plus/Plus Query 177912 GTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTG 177971 || ||||||| | || || ||||| || || || || || || ||||| || ||||| Sbjct 551416 GTCAAAATGC---AGATCTTTGTGAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTC 551472 Query 177972 GAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCT 178031 ||| ||| ||||| || || || |||||| |||||||| || || || ||||||||| Sbjct 551473 GAACCCTCGGACACAATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAGGGAATCCCT 551532 Query 178032 CCGGACCAGCA 178042 || || ||||| Sbjct 551533 CCAGATCAGCA 551543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203108750972646