Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value SEQ58105 87.8 2e-12 >SEQ58105 Length=99015 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || || || | |||| ||||||||| ||||| | || ||||||||||| || Sbjct 16459 ATGTATGTGTCAATTAATAGGGAGTACATTTCAGAGTGAACATTTTCCATGGCTATTTGG 16400 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || || || ||| ||| ||| || | | |||||| || | ||||| ||| ||||| Sbjct 16399 AACCCATAGAAGAATCTGGCCTCAGTAACTTGAACCTCTTGTGAAAATCGCTCCACTAGA 16340 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAAT 17411 ||||| || || || || || || || ||||| || | | || |||||||||| Sbjct 16339 TTTTCATTGACAATTCCATCAGATGCAGCAAAAAATGCTAGAACGTGTTTAATGAAAT 16282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517111126938120