Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value SEQ58105 100 3e-16 >SEQ58105 Length=99015 Score = 100 bits (110), Expect = 3e-16 Identities = 129/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || || ||||| | || ||||||||| ||||| | || || |||||||| || Sbjct 16459 ATGTATGTGTCAATTAATAGGGAGTACATTTCAGAGTGAACATTTTCCATGGCTATTTGG 16400 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || ||||||||| ||| ||||| | | ||| || || ||||||| ||| | || Sbjct 16399 AACCCATAGAAGAATCTGGCCTCAGTAACTTGAACCTCTTGTGAAAATCGCTCCACTAGA 16340 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAAT 16649 || ||||| || || || ||| |||||||||||| || | | ||| |||||||||| Sbjct 16339 TTTTCATTGACAATTCCATCAGATGCAGCAAAAAATGCTAGAACGTGTTTAATGAAAT 16282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510985074003880