Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq147 89.7 7e-13 >seq147 Length=313122 Score = 89.7 bits (98), Expect = 7e-13 Identities = 132/184 (72%), Gaps = 5/184 (3%) Strand=Plus/Plus Query 73908 ATTGTTCATAGATATCTTCAA-AATGGAGATATACTAGTGCTAAATAGACAACCTACTTT 73966 ||||| ||||| | ||| | ||||| ||||| | | || ||| |||||||| | | Sbjct 16568 ATTGTCCATAGGCA-CTTAATCAATGGTGATATGATGATTCTTAATCGACAACCTTCACT 16626 Query 73967 ACATAAAGCATCAATGATGGCTCTTCGAGTTAAAATTAT---GGATGTAAAAACCTTTAA 74023 ||||||| | |||||||||| | || | ||| | || || |||||| || | Sbjct 16627 ACATAAACCTAGTATGATGGCTCATAAAGCAAGAATCTTAAAGGGTGAAAAAACTTTAAG 16686 Query 74024 ATTTAATCTTGCATGCACTAAACCATATAATGCAGATTTTGATGGAGATGAAATGAATGC 74083 ||| || |||| | |||| | ||||| || ||||||||||| |||||||||||||| Sbjct 16687 ATTACATTATGCAAACTGTAAATCCTATAACGCTGATTTTGATGGTGATGAAATGAATGC 16746 Query 74084 TCAT 74087 |||| Sbjct 16747 TCAT 16750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679243704308880