Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_006651.1 Length=19161 Score E Sequences producing significant alignments: (Bits) Value SEQ18159 91.5 2e-14 SEQ12317 91.5 2e-14 seq7158 91.5 2e-14 seq6295 91.5 2e-14 seq4629 91.5 2e-14 seq4409 91.5 2e-14 seq3782 91.5 2e-14 seq1928 91.5 2e-14 seq1742 91.5 2e-14 seq112 91.5 2e-14 SEQ41988 87.8 2e-13 SEQ40388 86.0 8e-13 SEQ31944 86.0 8e-13 SEQ29765 86.0 8e-13 SEQ16177 86.0 8e-13 SEQ14567 86.0 8e-13 SEQ14348 86.0 8e-13 seq4767 86.0 8e-13 seq3352 86.0 8e-13 seq3027 86.0 8e-13 SEQ58116 84.2 3e-12 SEQ37882 84.2 3e-12 SEQ20094 82.4 9e-12 seq6691 82.4 9e-12 seq3609 82.4 9e-12 seq2300 82.4 9e-12 seq1210 82.4 9e-12 seq3738 80.6 3e-11 >SEQ18159 Length=4717 Score = 91.5 bits (100), Expect = 2e-14 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 3052 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 3111 >SEQ12317 Length=1474 Score = 91.5 bits (100), Expect = 2e-14 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 206 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 147 >seq7158 Length=111465 Score = 91.5 bits (100), Expect = 2e-14 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 49840 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 49899 >seq6295 Length=2619 Score = 91.5 bits (100), Expect = 2e-14 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 355 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 296 >seq4629 Length=98213 Score = 91.5 bits (100), Expect = 2e-14 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 ||||||| ||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 27323 GAAACAATTTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 27264 >seq4409 Length=101917 Score = 91.5 bits (100), Expect = 2e-14 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 74446 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 74505 >seq3782 Length=104018 Score = 91.5 bits (100), Expect = 2e-14 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 40296 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 40355 >seq1928 Length=308984 Score = 91.5 bits (100), Expect = 2e-14 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 64190 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 64249 >seq1742 Length=302800 Score = 91.5 bits (100), Expect = 2e-14 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 262157 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 262216 >seq112 Length=625878 Score = 91.5 bits (100), Expect = 2e-14 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 404781 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 404840 >SEQ41988 Length=927 Score = 87.8 bits (96), Expect = 2e-13 Identities = 56/60 (93%), Gaps = 1/60 (2%) Strand=Plus/Minus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 752 GAAAAAAATTT-TCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 694 >SEQ40388 Length=673 Score = 86.0 bits (94), Expect = 8e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| ||| || ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 73 GAAAAAAAATTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 132 >SEQ31944 Length=625 Score = 86.0 bits (94), Expect = 8e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 491 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCACATCATGAGTCGTGCAATA 550 >SEQ29765 Length=719 Score = 86.0 bits (94), Expect = 8e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| |||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct 629 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGAAGCTTCGCATCATGAGTCGTGCAATA 688 >SEQ16177 Length=21469 Score = 86.0 bits (94), Expect = 8e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 67 GAAAAAAATTATTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 8 >SEQ14567 Length=1696 Score = 86.0 bits (94), Expect = 8e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| Sbjct 1493 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAATCGTGCAATA 1552 >SEQ14348 Length=1744 Score = 86.0 bits (94), Expect = 8e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| || ||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 879 GAAAAAATTTTTTCGATCGTAAAGCACTCTCTGATGCTTGGCATCATGAGTCGTGCAATA 938 >seq4767 Length=90527 Score = 86.0 bits (94), Expect = 8e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| |||||||||| |||||||||||||||| ||||| |||||||||||||| Sbjct 65925 GAAAAAAATTTTTCGATCGTAACGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 65984 >seq3352 Length=179486 Score = 86.0 bits (94), Expect = 8e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||| ||||||||||||||||||| ||||| |||||||||||||| Sbjct 80121 GAAAAAAATTTCTCGATCGCAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 80062 >seq3027 Length=1635129 Score = 86.0 bits (94), Expect = 8e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||| ||||||||||||||| ||||| |||||||||||||| Sbjct 797089 GAAAAAAATTTTTCGATCGTAAAACACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 797148 >SEQ58116 Length=1546603 Score = 84.2 bits (92), Expect = 3e-12 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 7537 AAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 ||| |||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct 698236 AAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCCTGCAATA 698178 >SEQ37882 Length=1349 Score = 84.2 bits (92), Expect = 3e-12 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 7537 AAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 ||| || ||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 926 AAAAAATTTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 984 >SEQ20094 Length=504 Score = 82.4 bits (90), Expect = 9e-12 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| || ||| ||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct 377 GAAAAAATTTTTTCGATCGTAAAGCACACTCTGATGCTTCGCATCATGAGTCGTGCAATA 436 >seq6691 Length=20519 Score = 82.4 bits (90), Expect = 9e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 7538 AACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 || |||||| ||||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct 3281 AAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTTGTGCAATA 3224 >seq3609 Length=116234 Score = 82.4 bits (90), Expect = 9e-12 Identities = 52/55 (95%), Gaps = 1/55 (2%) Strand=Plus/Minus Query 7541 AAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 58142 AAATTT-TCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 58089 >seq2300 Length=135793 Score = 82.4 bits (90), Expect = 9e-12 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| | ||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 39065 GAAAAATTTTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 39124 >seq1210 Length=382975 Score = 82.4 bits (90), Expect = 9e-12 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||| |||||||||| ||||| |||||||||||||| Sbjct 338405 GAAAAAAATTTTTCGATCGTAAAGCACGCTCTGATGCTCCGCATCATGAGTCGTGCAATA 338346 >seq3738 Length=38196 Score = 80.6 bits (88), Expect = 3e-11 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 7537 AAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 ||| || ||| |||||| |||||||||||||||||||| ||||| |||||||||||||| Sbjct 9463 AAAAAATTTTTTCGATCATAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 9521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 61149279097508