Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_006652.1 Length=4981 Score E Sequences producing significant alignments: (Bits) Value seq2275 100 9e-18 >seq2275 Length=35474 Score = 100 bits (110), Expect = 9e-18 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 1075 GATAACAAAAGTATTCCTACGTATTAtttttttATAGACATTCTTTACACTAGGAGGGTA 1134 |||||||||||| || |||||||||||||||| ||||| |||| |||||||||| ||||| Sbjct 20352 GATAACAAAAGTGTTTCTACGTATTATTTTTT-ATAGATATTCGTTACACTAGGCGGGTA 20410 Query 1135 CTTGGATCTCCTTAAAG 1151 ||||||||| |||||| Sbjct 20411 CTTGGATCTAATTAAAG 20427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15815574105510