Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_006653.1 Length=26062 Score E Sequences producing significant alignments: (Bits) Value seq2555 80.6 4e-11 >seq2555 Length=142971 Score = 80.6 bits (88), Expect = 4e-11 Identities = 121/167 (72%), Gaps = 10/167 (6%) Strand=Plus/Plus Query 5997 CAAAACACAATATTAAATAACATAAATTATCTTAATAATGAACCGTTACACT---TCGCC 6053 ||| | ||| || |||||||| |||| || | |||||| | |||| | || || || Sbjct 125673 CAATAAACAGCATAAAATAACACAAATAATGTAAATAATAAGCCGTAATGCTCAATCACC 125732 Query 6054 ATGCATAAATTTAGCTTATAATAATGATGAGATGTATATCAATTTATCGGTCGTATACGG 6113 | |||| ||||||||||| ||| | ||||| | | |||||||||| ||| Sbjct 125733 A--CATAGGATTAGCTTATAAGAATAAGAGGATGTTAAAGCACCCATCGGTCGTA--CGG 125788 Query 6114 TGTAGGG-GTTAGTTATCGGTCTGG--AGAGCGCGTCTTGGGTTCGA 6157 ||||||| ||||| ||||||||||| || ||||| || | |||||| Sbjct 125789 TGTAGGGTGTTAGGTATCGGTCTGGCAAGCGCGCGGCTCGCGTTCGA 125835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 83215330919925