Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_006662.1 Length=17477 Score E Sequences producing significant alignments: (Bits) Value seq2555 80.6 3e-11 >seq2555 Length=142971 Score = 80.6 bits (88), Expect = 3e-11 Identities = 121/167 (72%), Gaps = 10/167 (6%) Strand=Plus/Minus Query 4066 TCGAACCCAAGACGCGCTCT--CCAGACCGATAACTAAC-CCCTACACCGTATACGACCG 4122 |||||| | || ||||| || ||||||||||| ||||| |||||||||| |||||||| Sbjct 125835 TCGAACGCGAGCCGCGCGCTTGCCAGACCGATACCTAACACCCTACACCG--TACGACCG 125778 Query 4123 ATAAATTGATATACATCTCATCATTATTATAAGCTAAATTTATGCATGGCGA---AGTGT 4179 || | | ||||| | ||| ||||||||||| |||| ||| || || | Sbjct 125777 ATGGGTGCTTTAACATCCTCTTATTCTTATAAGCTAATCCTATG--TGGTGATTGAGCAT 125720 Query 4180 AACGGTTCATTATTAAGATAATTTATGTTATTTAATATTGTGTTTTG 4226 |||| | |||||| | || |||| |||||||| || ||| | ||| Sbjct 125719 TACGGCTTATTATTTACATTATTTGTGTTATTTTATGCTGTTTATTG 125673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 55764663640480