Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value SEQ21942 365 4e-96 SEQ17521 129 5e-25 seq2773 107 2e-18 seq4618 102 7e-17 seq2744 91.5 1e-13 >SEQ21942 Length=42535 Score = 365 bits (404), Expect = 4e-96 Identities = 817/1212 (67%), Gaps = 20/1212 (2%) Strand=Plus/Plus Query 55818 AAAATCGTTGCCGCATATTTTGTCGAGTGGGGTGTTTATCATAGAAACTTTCCTGTCACT 55877 ||| |||| | || |||||||| |||||||||||||| | |||||| || || || | Sbjct 34595 AAAGTCGTCGGAGCTTATTTTGTGGAGTGGGGTGTTTACCCTAGAAAATTCCCAGTAGAT 34654 Query 55878 CGAGTTCCCACTCCTAATCTGTCACACATTCTCTACGGATTCATACCGATATGCGGCGGC 55937 || |||| ||| ||||| |||| |||| |||||||| || || || || ||||| Sbjct 34655 AAGGTACCCATTCCGAATCTTACACATCTTCTTTACGGATTTATCCCCATCTGTGGCGGT 34714 Query 55938 GACGGCATTAACGACAGTCTCAAGACGATAACCGGTAGTTTTGAAGCGCTTCAGCGATCG 55997 ||||| |||||||||||| | || || || ||||| |||| | || ||||| Sbjct 34715 GACGGAATTAACGACAGTTTGAAAGAAATCGAAGGAAGTTTCCAAGCTTTGCAACGATCT 34774 Query 55998 TGTTCGGGTCGAGACGACTTCAAAGTGTCGATTCATGACCCGTGGGCTGCGGTCCAAAAG 56057 || || ||||| ||||||||||| || || || ||||| ||||| || | ||||| Sbjct 34775 TGCAGCGGGCGAGAGGACTTCAAAGTTTCTATCCACGACCCTTGGGCAGCTTTACAAAAA 34834 Query 56058 CCCCAAAAACAAGTGACCGCATGGAACGAACCATACAAAGGCAACTTTGGACAATTGATG 56117 || || || || || | ||||||||||| ||||||||||||||||||||| ||||| Sbjct 34835 CCACAGAAGGGTTTGTCCTCCTGGAACGAACCTTACAAAGGCAACTTTGGACAACTGATG 34894 Query 56118 GCAGCTAAACTGGCGAATCCCCATGTTAAAGTGCTGCCTTCGATCGGTGGCTGGACTTTA 56177 | |||| || | || || | || || || || || ||||| |||||||| || Sbjct 34895 TCTTTAAAACAAGCTAGACCTGATCTGAAGGTTCTTCCATCAATCGGGGGCTGGACATTG 34954 Query 56178 TCCGATCCGTTCTTTTACTTTCACGATGCGGTCAAACGCAAAATTTTTGTCGATTCTGTC 56237 | ||||| |||| | |||| | ||| ||| ||| | | |||||| | || || Sbjct 34955 GCAGATCCATTCTACTTCTTTGATGATAAGGTAAAAAGAGATCGTTTTGTGGCATCAGTG 35014 Query 56238 GTCGAGTTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGACTGGGAGTTTCCC 56297 || || | || || |||||||| ||||| ||||| ||||| || |||||||| || Sbjct 35015 AAAGACTTCCTCCAAACTTGGAAATTCTTCGACGGTGTTGACATTGATTGGGAGTTCCCT 35074 Query 56298 GGCGGAAAGGGGGCCAATTCCAACGTCGGCGATGCCGAACG-CGATCGCA--ACACGTAC 56354 || ||||| || || ||| | ||| |||| | || || | || | | | | || | Sbjct 35075 GGTGGAAAAGGTGCTAATCCTAACCTCGGTG-GACCAAATGACGGT-GAAGTTTATGTCC 35132 Query 56355 ACGATTCTGTTACGAGATTTACGCGAAGCGCTAGACCGA-CTAAGCCTCGAAACGAATCG 56413 | ||| | ||| ||||| ||| ||| || ||| ||| | || || | Sbjct 35133 A----GCTGATGAAAGAGTTACGTGAAATGCT-GAACGAGCTATCCACGGAGACCGGTAA 35187 Query 56414 AACATACGAGCTAACCAGCGCCATTAGCGCCGGCGATGACAAAATCACGGTCGTCGACTA 56473 | ||| || || || ||| ||||| || || || || ||| || || || || Sbjct 35188 GAAATATGAACTGACATCCGCTATTAGTGCTGGTTGGGATAAGATCCAAGTAGTTGATTA 35247 Query 56474 CACAGCCGCTCAAAAATATTTAGATTATAtttttttGATGACATACGATTTTAAAGGCGC 56533 || ||||| ||||| | ||| |||| ||||| |||| ||||| |||||||| || Sbjct 35248 CAGGAAAGCTCAGCAATATATGGATCATATCTTTTTAATGAGTTACGACTTTAAAGGAGC 35307 Query 56534 TTGGTCGAATAGCGATCTGGGCTATCAGACGACTTTGTACGCGCCTGCGTTTAATCCTAA 56593 ||||| ||| | ||| || |||| || | || || || || || | ||||| || Sbjct 35308 GTGGTCAAATGACACTCTTGGACATCAAACACCGTTATATGCACCAGCATGGAATCCAAA 35367 Query 56594 AGAACACTATACGACCGATTTTGCGGTTCGTGCTCTGCTTA-AACAAAAAGTCGAGAATA 56652 |||| ||| || || || |||| ||| ||| |||| ||| |||| | || Sbjct 35368 AGAAACCTACACAACTGACTTTGGAGTTAAAAATCT-CTTAGCCCAAGGAGTCAACCCTA 35426 Query 56653 AAAAGATTGTAGTCGGCGTAGCTATGTACGGTCGCGGGTGGACCGGCGTCGGTGATTTCG 56712 | |||||| |||| || ||||| ||||||||||| || ||||| || ||| | | | Sbjct 35427 AGAAGATTATAGTTGGTGTAGCGATGTACGGTCGTGGTTGGACTGGAGTCCAAAACTAC- 35485 Query 56713 TCGACA-AAAACAATCCATTTTCCGGCACGGCCAAGGGACCTGTCAAAGGTACCTGGGAA 56771 ||| | || ||||| || | || |||| || ||| ||||| || ||| | Sbjct 35486 ---ACAGATAATAATCCTTTCACTGGAGTAGCCACAGGTCCTTGTAAAGGGACGTGGCAG 35542 Query 56772 GACGGAGTCGTTGATTTTAGAGAAATTTTCAACTCTTTTGTGACTAACAAACCGATGGAT 56831 || || || || || | ||||||||| || ||| | ||| | | Sbjct 35543 GATGGTGTGGTCGACTACAGAGAAATTGCAAATGAAATTGCAGCAGGGAAATGGGAGTTC 35602 Query 56832 CGTTACGATGCTATAGCAAAAGCGTCATACGTTTTTAATAATTCGACAGGTGATCTCATC 56891 | ||| ||| | | ||| ||||| |||| || || | | | ||||| ||||| || Sbjct 35603 CATTATGATAATGTGGCACAAGCGCCATATGTCTTCCGTCCTGCCACAGGGGATCTAATT 35662 Query 56892 ACTTACGACAGTCCCCAGTCGGTTCTGGATAAAGCAAAGTATGTGTTAGACTACAACTTG 56951 || ||||||| ||| || ||| | || |||| ||||||||| | | | || | Sbjct 35663 ACATACGACAATCCAAGATCCGTTATAGAGAAAGGAAAGTATGTTAGAAATAATAAGCTT 35722 Query 56952 GGTGGGTTGTTTGCGTGGGAAATCGATGCAGATAACGGATTACTT-TTAAACGCAATGAA 57010 || || ||||||||||||||||| ||||||||| || | |||| || || || ||||| Sbjct 35723 GGAGGTTTGTTTGCGTGGGAAATAGATGCAGAT-ACTGGGGACTTATTGAATGCTATGAA 35781 Query 57011 TAGTGGTCTTGG 57022 || |||||||| Sbjct 35782 TATGGGTCTTGG 35793 >SEQ17521 Length=26855 Score = 129 bits (142), Expect = 5e-25 Identities = 906/1445 (63%), Gaps = 27/1445 (2%) Strand=Plus/Minus Query 132197 AGATGTTGATTTACTATTTGATATTCACCCGATAAGACTCTTCGTACGTACAAATTACTA 132256 ||||| || || || | |||| |||| || ||||| |||| || | ||| | ||| | Sbjct 3662 AGATGATGGTTCACAACTTGAAATTCTCCTGATAATACTCGTCTTTGGTATATATTTGAA 3603 Query 132257 GTAAACGGCTCGAACGATTCGTTGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCATG 132316 ||||| || || || ||||| || || || | ||| || || || | |||||| ||||| Sbjct 3602 GTAAATGGTTCAAAGGATTCATTATTGCCAAGTATCTGTGCCGTAGATGCCGTTGGCATA 3543 Query 132317 TAGGCAATCAATAATGAATTGCGCAGCCCGTGTATGGCCATTTGCCGTTTAAGCTCGTCC 132376 || | | | ||||| || | || ||| | || |||| |||||| | || Sbjct 3542 GGCGCCAGTAGCAGAGAATTACGAATTCCATGTTTAGCTATTTTTTCTTTAAGAGCAACC 3483 Query 132377 CAGTTCCACAGATCATTCGATTGAGAGATATTCCACAAATCAAACTGTAAATGACCGCTA 132436 || | ||| |||||| | | | | ||||||||| |||||| || ||| || Sbjct 3482 CAATCCCAGAGATCAGTGG---GCGTCTTATTCCACATATCAAATTGCAAAATCCCTTGG 3426 Query 132437 CTTGCAGGAGATCCGTTATAAGAATCGTATGCTCCGTGTAATTTGGCAAGTTCTATGCTC 132496 || ||||| || | ||| ||| || |||| | | | || | ||| ||| Sbjct 3425 CTAACAGGACTACCTTCATATGAACTATAAACTCCCTCTTTCTCCGCTAATTCACAGCTA 3366 Query 132497 TGACTCAGGGCACCATAATAAATAGTCTCTGAGATTTTTCTATTCAATTCCCTTGCTTGT 132556 || || || ||||| |||||||| | || | | || || | ||||| | Sbjct 3365 GCTTCCAAAGCTCCGTAATAGATAGTCTCAAATATCTGTTGGTTTAACAACAATGCTTTT 3306 Query 132557 TGACTGTCGTAGGGCAAATTTAAAATAGCGAACGCATCGGCAAGTCCCTGAATGCCGATA 132616 | ||| || || || | | | | || ||||| || | || || | || ||| Sbjct 3305 TCACTTTCATAAGGGTAGCGCATCAGCACAAAGGCATCAGCTAAACCTTGGACTCCAATA 3246 Query 132617 CCGATGGGTCTATGTTTAAAATTCGATACTTGTGCGCTAGTCAGCGGATAAAAGTTTTTG 132676 || || ||||||||| | ||| || || || | | |||||| | || Sbjct 3245 CCTATTGGTCTATGTCGCATATTGGAGTTTTTAGCTTCTGGAACTGGATAATAATTGACA 3186 Query 132677 TCTATTATTTTATTGAGATTGTTAGTGACAACTCTAGCCACTTTATATAGCGATTCAAAG 132736 ||||| |||||||| || || | || | || | | | |||| | || | |||||| Sbjct 3185 TCTATAATTTTATTTAGGTTTTGGGTTATAATTTTTGTAACTTCTTTTAACTTTTCAAAA 3126 Query 132737 TCAAAGTTTTTAGTCCTTTTGTTGGCAAAACAATTGACGGCAATCGAGGCCAAATTGCAT 132796 | | || || || | | | |||| ||| | ||||| || || ||||| ||| Sbjct 3125 TTGTACGTTCTA-TCATCATTTA--CAAACATATTCAAAGCAATAGAAGCTAAATTACAT 3069 Query 132797 ACGGCTGTCTCTT-TATTATCGCTATACTGTACGATTTCTGCACACAAATTACTGTTTCG 132855 || ||| || | || | | | || | ||| ||||||| ||| | |||||| | Sbjct 3068 ACTGCTACTTCATCTACTGATG-TGTATTCTACTATTTCTGTACATAGATTACTACATTT 3010 Query 132856 AATAACTCCCAAGtttttttGATTGTTTTTCTCGTTTACGTTA-TCTTTATGCAACATGT 132914 ||| ||| | ||||| ||||| | || || |||| | | ||||| | |||||| Sbjct 3009 AATTGTTCCTAGATTTTTCTGATTACTCTT-TCTGTTACATGAATCTTTGTATAACATGA 2951 Query 132915 ACGGACCTCCGGTTTCGACCTGAATTTCGATAATTT--TTCTGTGAAGATCTAACGCCAA 132972 | ||| || ||||| || || ||| | ||| ||| | || || || Sbjct 2950 ATGGAGTGCCTGTTTCAACTTGTGCTTCTACAATAGCCTTCCATAAAA--CTTGTGCTTT 2893 Query 132973 AATTTGTTCTTTAAACTTGCCCTGAGTCTCGTAACTTTCGTATAATCGCT-CAAATTCTT 133031 | ||||| ||| | | | |||| || |||| || || ||| |||| |||| Sbjct 2892 TACTTGTTTAACAAATCTTTTTTCATTCTCATACTTTTCATA-AAGGGCTTCAAACTCTT 2834 Query 133032 CGCCATAGCAGTCGTTCAAACCGGGACACTCGTCAGGACACATCAATGACCATTTTTCTC 133091 | || | || || |||||| ||||| || | ||||||||||| ||| ||||| Sbjct 2833 CTCCCCAACAATCTGCCAAACCAGGACAGTCATGGGGACACATCAAACTCCAATTTTCAT 2774 Query 133092 CTGCGCTCACCCTTTTCATGAACAACGAAGGTGTCCACATGGCAAAAAATAAATCGCGAG 133151 | || |||||||| ||||| ||| |||| | ||| |||| || || | || Sbjct 2773 TTTTTTCAACTCTTTTCATAAACAAATCTGGTATCCATAAAGCATAAAACAATTCCCTAG 2714 Query 133152 CCTTCATATCTTCCGCGCCCATATTTCGTTTCAAGTCCaaaaaagtaaaaaTGTCTGCAT 133211 | | ||||| || |||| ||||| || ||||| ||| | |||| || Sbjct 2713 CTCGAACTTCTTCTTTACCAGTATTCTTTTTCAGATCTAAAAACTCAAACACATCTGAAT 2654 Query 133212 GCCAAGGCTCGATATATACGGCCAAAGCGCCTTTCC---TTTTACCTCCCTGATCCACAT 133268 |||| || || | |||||| || || || ||| | | ||||| || ||||| |||| Sbjct 2653 GCCATGGTTCTAAATATACAGCAAATGCCCCTGGACGCTTGTTACCACCTTGATCTACAT 2594 Query 133269 GTCTAAGCATGCTGTTGAAGACACGCAATGCAGGACCCAATCCTGCGGCAGTACCGTTGG 133328 ||| ||||||| | || | || || | | ||| | ||| || | Sbjct 2593 ATCTGGCTGTGCTGTTATATACTCTTAACATTGGGACAAGTCCATTTGATACACCATTTG 2534 Query 133329 TG---GATTTGATTTTACTGTTAGCGGCACGAATTTGAGAAACGTTAAGGCCTATACCGC 133385 || | | | | ||| ||||| || || ||| | ||| || || || | Sbjct 2533 TGCCAGCTATACATGTACCTTTAGCT---CGGATACAGTGAACATGAAGCCCAATGCCAC 2477 Query 133386 CTCCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTTTATAGATGCCATTGATGCTGT 133445 || | ||||||||||| |||||| | || ||||| | ||| || || | || |||| Sbjct 2476 CTGCAGATTTAGATATCAAGGCACATTGTTTCAGAGTGTCATATATTCCCTCAATACTGT 2417 Query 133446 CTTCCTGGATGTTGAGCAAATAACACGACGACATCTGAGGCATTTTCATGCCAGAAGAAA 133505 | || | ||| | || |||| || |||| ||||| || | ||| ||||| Sbjct 2416 CATCTTTCATGGCCAATAAGAAACAAGATGACAATTGAGGTCTTGGAGTAGCAGCAGAAA 2357 Query 133506 ACAAAGTGGGACTAGCGTGAGT-AAACAGCTTTGATCGCATCAATCTGTAGGACTCAATT 133564 | ||||| ||||| |||||||| ||| | | | | || ||| |||||| | |||| Sbjct 2356 ATAAAGTAGGACTGGCGTGAGTGAAATACTTCTCAGACAATAAAT-TGTAGGTGTTAATT 2298 Query 133565 GCGCTTTCAATGTCTTCACCATGAATTTGTAGCGCTACACGCATCAGCATATGTTGAGGT 133624 || ||||||||||| ||||| || | ||||||||||| ||||||||||| ||| Sbjct 2297 GCTGAATCAATGTCTTCTCCATGTATACCAATAGCTACACGCATTAGCATATGTTGTGGT 2238 Query 133625 CGCTC 133629 | ||| Sbjct 2237 CTCTC 2233 >seq2773 Length=85211 Score = 107 bits (118), Expect = 2e-18 Identities = 168/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 |||||||| | ||||| || ||| | ||||||||| | || ||| | || || ||| || Sbjct 66163 AAAATGCAGATATTTGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAG-CC 66221 Query 24048 AACG-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | || | || || || | || ||| || ||| ||||||||||| || |||||||| Sbjct 66222 ATCGGATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCCGA 66281 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGAT 24164 ||| ||| | || || | || || || || || |||||| | | | || ||| ||| Sbjct 66282 TCAGCAGCGTCTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGTACACTGTC--TGAT 66339 Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || ||||||||||| |||||||| |||| || || ||| | || |||| ||| Sbjct 66340 TACAACATTCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGGA 66393 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| ||||| | || || || |||||||| | ||||| ||| ||| Sbjct 66393 AATGCAAATCTTTGTTAAAACTCTCACAGGTAAGACGATTACCTTAGAAGTAGAG-CCAT 66451 Query 24050 C-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 | || || ||||| | || || || || |||||||||||||| ||||| || | Sbjct 66452 CAGATACTATCGAAAACGTAAAGGCGAAAATCCAAGACAAAGAAGGCATCCCTCCGGACC 66511 Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATA 24168 | || | || |||| | ||||||||||| ||||||| | | | | || || | Sbjct 66512 AGCAACGGCTCATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACCCTGTCTGACTACA 66571 Query 24169 ACATTCAAAAAGAATCTACAATTCA 24193 ||||||||||||| ||||| |||| Sbjct 66572 ACATTCAAAAAGAGTCTACTCTTCA 66596 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || || | |||||||| | ||||| | ||||| || | Sbjct 67305 AATGCAGATCTTTGTCAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTAGAACCTTC 67364 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || ||| | |||||| || || ||||| |||||||| ||||| || || Sbjct 67365 AGATACAATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCA 67424 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||| |||| || | | || || ||||| ||||||| ||| | | || || || Sbjct 67425 ACAGCGACTCATCTTTGCTGGAAAACAACTGGAAGATGGGCGAACCCTATCTGACTACAA 67484 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||||||| || | || ||||| ||| | | ||||||| Sbjct 67485 CATTCAAAAAGAATCCACTTTGCACTTAGTATTACGTCTCCGAGGAGG 67532 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| |||||| | || || || | ||||| | ||||| || | Sbjct 66622 ATGCAAATTTTTGTGAAAACACTGACAGGCAAGACTATTACTTTGGAAGTTGAACCTTCA 66681 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || ||| | || ||| || || ||||| |||||||| ||||| || ||| Sbjct 66682 GATACAATTGAGAATGTTAAAGCCAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCAA 66741 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGCGATTATA 24168 ||| |||| || | | || || ||||| ||||||| | | || ||| | |||| | Sbjct 66742 CAGCGACTCATCTTTGCTGGAAAACAACTAGAAGATGGGCGTACACTGTCTG--ATTACA 66799 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 |||||||||| |||||||| |||| || || ||| | || |||| ||| Sbjct 66800 ACATTCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGGA 66849 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || | |||||||| | ||||| | ||||| || | Sbjct 66849 AATGCAAATCTTTGTCAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTTGAACCTTC 66908 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || ||| | || ||| || || ||||| |||||||| ||||| || || Sbjct 66909 AGATACAATTGAGAATGTTAAAGCCAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCA 66968 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||| |||| || | | || |||||||| ||||||| ||| | || || || || Sbjct 66969 ACAGCGACTTATCTTTGCTGGAAAGCAACTGGAAGATGGGCGAACCCTCTCTGACTACAA 67028 Query 24170 CATTCAAAAAGAATCTACAATTCA 24193 |||||||||||| || || |||| Sbjct 67029 CATTCAAAAAGAGTCCACTCTTCA 67052 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| |||||| |||| || || | ||||| | ||||| || | Sbjct 67078 ATGCAAATTTTTGTGAAAACACTAACGGGCAAGACCATTACTTTGGAAGTTGAACCTTCG 67137 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || ||| | |||||| || || || || |||||||| ||||| || ||| Sbjct 67138 GACACAATTGAGAATGTCAAAGCCAAAATCCAGGATAAGGAAGGCATCCCTCCAGACCAA 67197 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| |||| || | | || |||||||| ||||||| ||| | | || || || Sbjct 67198 CAGCGACTTATCTTTGCTGGAAAGCAACTGGAAGATGGGCGAACCCTGTCTGACTACAAT 67257 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 ||||||||||| || || |||| Sbjct 67258 ATTCAAAAAGAGTCGACTCTTCA 67280 >seq4618 Length=10119 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| ||| | || || | ||||| ||| ||| | Sbjct 430 ATGCAAATTTTCGTCAAGACCTTGACTGGCAAAACTATCACTCTTGAAGTTGAG-CCATC 488 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||| | || || || ||| |||||||| || || || || || || Sbjct 489 AGACACCATCGAAAATGTTAAGGCCAAAATTCAAGACAAAGAGGGTATCCCACCAGACCA 548 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||| || || | | ||||||||| || ||||||| | | | || || || || Sbjct 549 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCGGACTACAA 608 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| ||| | ||||| || | |||||||| || || Sbjct 609 TATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGGGGTGG 656 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| ||| | || || | ||||| ||| ||| | Sbjct 202 ATGCAAATTTTCGTCAAGACCTTGACTGGCAAAACCATCACTCTTGAAGTTGAG-CCATC 260 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| || | || || || ||| |||||||| || || || || || || Sbjct 261 AGACACCATTGAAAATGTTAAGGCCAAAATTCAAGACAAAGAGGGTATCCCACCAGACCA 320 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||| || || | | ||||| || || ||||||| | | | || || || || Sbjct 321 GCAGAGGCTCATCTTTGCGGGCAAACAGCTTGAAGATGGCCGCACACTCTCGGACTACAA 380 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||||||| | ||||| || | ||||||||||| || Sbjct 381 TATCCAAAAAGAATCTACACTCCATTTGGTACTGAGATTGAGAGGTGG 428 >seq2744 Length=156805 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | |||||||| ||| | ||||| ||| | |||||| | || || || | Sbjct 156567 AACATGCAGATTTTTGTAAAGACACTCACTGGCAAAACTATTACCCTAGAGGTAGAACCT 156626 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 ||||| || || | || || || ||| |||||||| || || || || || Sbjct 156627 TCAGACACTATTGAAAATGTAAAGGCTAAAATTCAAGACAAAGAGGGTATCCCGCCAGAC 156686 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||||| || || | | || ||||| || ||||||| | | || || || Sbjct 156687 CAGCAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGTCGTACACTCTCTGACTAC 156746 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||||||||| ||| | ||||| || | ||||||||||| || Sbjct 156747 AACATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 156796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429584097249645