Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq1360 78.8 2e-11 >seq1360 Length=330242 Score = 78.8 bits (86), Expect = 2e-11 Identities = 103/143 (72%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 2675 CCGTGAAGGGCTTAATAAAGCTTCCAACAGTCTCCATCGACAATGTATTCTTCCGGTTGC 2734 |||| |||||| | ||||||| | |||| ||||||||| ||||||| || | Sbjct 313789 CCGTAAAGGGCCTGTTAAAGCTCGACTCCGTCTGCATCGACAACAATGTCTTCCGATTAC 313848 Query 2735 ATTACCAGTTCACCGTGATCATCCTCATCGCGTTTTCATTGCTGGTGACTTCGCGGCAGT 2794 | ||| | ||| ||||||||||||||||| || ||| | || || ||||| | || | Sbjct 313849 ACTACAAAGCCACTGTGATCATCCTCATCGCTTTCTCACTCCTTGTTACTTCAAGACAAT 313908 Query 2795 ACTTCGGAAAGCTCATAGATTGC 2817 | ||||| | | |||||| ||| Sbjct 313909 ATATCGGAGACCCCATAGACTGC 313931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12470832796500