Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_008993.1 Length=5530 Score E Sequences producing significant alignments: (Bits) Value seq5085 114 5e-22 seq4519 104 8e-19 seq4450 104 8e-19 seq1279 104 8e-19 seq4987 100 1e-17 seq2235 96.9 1e-16 seq5148 93.3 1e-15 SEQ51436 91.5 5e-15 seq7332 91.5 5e-15 seq745 91.5 5e-15 seq592 91.5 5e-15 seq1821 89.7 2e-14 SEQ58206 86.0 2e-13 seq5031 86.0 2e-13 seq3242 86.0 2e-13 seq3362 84.2 8e-13 seq1774 84.2 8e-13 seq1552 84.2 8e-13 seq1682 82.4 3e-12 seq737 82.4 3e-12 SEQ65495 80.6 9e-12 SEQ43196 80.6 9e-12 seq8575 80.6 9e-12 seq5108 80.6 9e-12 seq4496 80.6 9e-12 seq95 78.8 3e-11 >seq5085 Length=160792 Score = 114 bits (126), Expect = 5e-22 Identities = 150/211 (71%), Gaps = 9/211 (4%) Strand=Plus/Plus Query 3952 CGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCCACATTCCGGCTACGTC 4011 |||||| ||||||||| | ||||| |||||||||||||||| || |||| ||| |||| Sbjct 41174 CGGAAATAAGCAACTTTCCGCCCGCTACGCTAAACGAAGTTGCAACTTTCCAGCTCCGTC 41233 Query 4012 GGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAGCCTCAGACCACATGTT 4071 | | || ||||||| |||| || ||| ||| ||||| ||||||||||| |||| || Sbjct 41234 GAGCAG-AAAATAGCATACACTCCCCGGGCAGTAAAAAACAAAGCCTCAGATCACA-ATT 41291 Query 4072 TGTTTGGNNNNNNNNNNNNNNNNNNNNNTCGGCCAACAGTTACATGTGATCTGAGACTTT 4131 | ||| ||| | || ||||||| ||| ||||||||| Sbjct 41292 TCTTT-------CAGCCTGGGCTTCGCTTCGACTAAAAGTTACAATGGATGTGAGACTTT 41344 Query 4132 TGTTATTTTTCTGGCCTACGTATGTAATATA 4162 | ||||||| ||| |||| | |||||||||| Sbjct 41345 TCTTATTTTACTGTCCTAGGGATGTAATATA 41375 >seq4519 Length=314619 Score = 104 bits (114), Expect = 8e-19 Identities = 91/112 (81%), Gaps = 1/112 (1%) Strand=Plus/Plus Query 3962 CAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCCACATTCCGGCTACGTCGGGTAGAAAA 4021 ||||||| || |||||||||||||| ||||||| |||||||| ||| || |||||| Sbjct 15287 CAACTTTTCTTCCACTGCGCTAAACGAAATTGCCACTTTCCGGCTCCGT-GGAAAGAAAA 15345 Query 4022 ATAGTGTACATACCTCGGCCAGAAAAAAGTAAAGCCTCAGACCACATGTTTG 4073 |||| || | ||||||| ||| |||||| ||||||||| | |||| ||||| Sbjct 15346 ATAGGATATACACCTCGGGCAGTAAAAAGGAAAGCCTCAAATCACACGTTTG 15397 >seq4450 Length=124698 Score = 104 bits (114), Expect = 8e-19 Identities = 107/139 (77%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 3938 TTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCCAC 3997 ||||||| ||| |||||||| | ||||||| ||||| |||| | ||||||||||| Sbjct 9039 TTCTGCCTTCCGGCCGGAAAGTGACAACTTTTTTCCCGCTACGCTGATCGAAGTTGCCAT 9098 Query 3998 ATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAGCC 4057 ||||||||| ||| ||| ||||||||||| |||| || | || || ||| ||||| Sbjct 9099 ATTCCGGCTCCGTTGGGCAGAAAAATAGTATACACACTTGGGACAACAAACCAGAAAGCT 9158 Query 4058 TCAGACCACATGTTTGTTT 4076 | |||| ||||||| ||| Sbjct 9159 TAAGAC--CATGTTTTTTT 9175 >seq1279 Length=657982 Score = 104 bits (114), Expect = 8e-19 Identities = 107/139 (77%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 3936 TTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCC 3995 ||||||||||||| ||||||| ||| ||||| |||||||| ||||||||| | | Sbjct 506790 TTTTCTGCCCTCCGGGCGGAAAG-GGCGTCTTTCCTCCCGCTGCGTTAAACGAAGATATC 506848 Query 3996 ACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAG 4055 || ||| | || | ||| | |||||||||| | | ||||||| || |||| |||| Sbjct 506849 ACTTTCTGACTCCATCGAGCAGAAAAATAGCAAATACACCTCGGGCATTGAAAAAGAAAG 506908 Query 4056 CCTCAGACCACATGTTTGT 4074 ||||||| ||||||||||| Sbjct 506909 CCTCAGATCACATGTTTGT 506927 Score = 104 bits (114), Expect = 8e-19 Identities = 107/139 (77%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 3936 TTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCC 3995 ||||||||||||| ||||||| ||| ||||| |||||||| ||||||||| | | Sbjct 510253 TTTTCTGCCCTCCGGACGGAAAG-GGCGTCTTTCCTCCCGCTGCGTTAAACGAAGATATC 510311 Query 3996 ACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAG 4055 || ||| | || | ||| | |||||||||| | | ||||||| || |||| |||| Sbjct 510312 ACTTTCTGACTTCATCGAGCAGAAAAATAGCAAATACACCTCGGGCATTGAAAAAGAAAG 510371 Query 4056 CCTCAGACCACATGTTTGT 4074 ||||||| ||||||||||| Sbjct 510372 CCTCAGATCACATGTTTGT 510390 >seq4987 Length=115837 Score = 100 bits (110), Expect = 1e-17 Identities = 108/141 (77%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 3936 TTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCC 3995 |||| |||||||| ||||||| | |||||| ||||||||||||| || ||| Sbjct 53719 TTTTTTGCCCTCCTAACGGAAAGTGACAACTTATCTTCCGCTGCGCTAAATAAAATTGGT 53778 Query 3996 ACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAG-AAAAAAGTAAA 4054 || |||||||| | ||||| ||||||||||| | | ||||| ||| ||||||||||| Sbjct 53779 ACTTTCCGGCTCCATCGGGCAGAAAAATAGTAAAGGAATCTCGGGCAGTAAAAAAGTAAA 53838 Query 4055 GCCTCAGACCACATGTTTGTT 4075 | |||| ||||||||| || Sbjct 53839 --CACAGATCACATGTTTATT 53857 >seq2235 Length=350033 Score = 96.9 bits (106), Expect = 1e-16 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 3936 TTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCC 3995 |||||||||||| ||||||| | || |||| | | | ||| || || ||||| Sbjct 15588 TTTTCTGCCCTCTGGGCGGAAAGTGACATGTTTCCCTCAGTAGTGCTTGACAAAATTGCC 15529 Query 3996 ACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAG 4055 || ||||| || |||| || ||||||||| ||||| ||||||| ||| ||||| |||| Sbjct 15528 ACGTTCCGACTCCGTCAGGCAGAAAAATATCGTACACACCTCGGGCAGTAAAAAAGAAAG 15469 Query 4056 CCTCAGACCACAT 4068 || |||||||||| Sbjct 15468 CCACAGACCACAT 15456 >seq5148 Length=183777 Score = 93.3 bits (102), Expect = 1e-15 Identities = 79/95 (83%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 3978 GCGCTAAACGAAGTTGCCACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTC 4037 |||||| ||||| ||||||| ||| |||| | || || ||||||||||| |||| ||||| Sbjct 3997 GCGCTATACGAA-TTGCCACTTTCTGGCTCCTTCAGGCAGAAAAATAGTATACACACCTC 4055 Query 4038 GGCCAGAAAAAAGTAAAGCCTCAGACCACATGTTT 4072 || || | || || ||||||||||| ||||||||| Sbjct 4056 GGGCA-ATAACAGAAAAGCCTCAGATCACATGTTT 4089 Score = 91.5 bits (100), Expect = 5e-15 Identities = 79/97 (81%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 3978 GCGCTAAACGAAGTTGCCACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTC 4037 |||||||||||||||||||| ||| |||| || |||| ||||||| ||| || ||||| Sbjct 171497 GCGCTAAACGAAGTTGCCACTTTCTGGCTTCGACGGGCAGAAAAA-AGTATATGCACCTC 171555 Query 4038 GGCCAGAAAAAAGTAAAGCCTCAGACCACATGTTTGT 4074 || || |||| ||||| |||| | ||||||||||| Sbjct 171556 GGACAATAAAATATAAAGTCTCATATCACATGTTTGT 171592 >SEQ51436 Length=1682 Score = 91.5 bits (100), Expect = 5e-15 Identities = 112/149 (75%), Gaps = 3/149 (2%) Strand=Plus/Minus Query 3929 TAACTTGTTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGG-CCGCTGCGCTAAACG 3987 |||| | ||||||||| ||| |||||| | ||||||| ||||||| ||||| Sbjct 589 TAACATTTTTTCTGCCATCCGGT-GGAAAGTGACAACTTTTTCTTCCGCTGCTCTAAAGT 531 Query 3988 AAGTTGCCACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAA 4047 || ||||| | || || || |||| || ||||||||||| | | ||||||| ||| | Sbjct 530 AAATTGCCCCTTTTCGCCTCCGTCAGGCAGAAAAATAGTAAAAACACCTCGGGCAGTCGA 471 Query 4048 AAGTAAAGCCTCAGACCACATGTTTGTTT 4076 || |||| ||||||| ||| ||||||||| Sbjct 470 AA-TAAAACCTCAGATCACGTGTTTGTTT 443 >seq7332 Length=143365 Score = 91.5 bits (100), Expect = 5e-15 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 3937 TTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCCA 3996 |||||||| ||| |||||| | ||||||| |||| || ||||||||||| | Sbjct 60433 TTTCTGCCGTCCGGGCGGAAAATGAAAACTTTCCTCTCGCTCTACTTAACGAAGTTGCAA 60374 Query 3997 CATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAGC 4056 | ||| ||| ||||||||||||| | | | |||| || |||| ||| ||||| | | || Sbjct 60373 CTTTCGAGCTTCGTCGGGTAGAAATAAAATATACAGACGTCGGACAGTAAAAAATTATGC 60314 Query 4057 CTCAGACCACATGTTTGTTT 4076 |||||| | ||||| |||| Sbjct 60313 CTCAGATTATATGTTCGTTT 60294 >seq745 Length=565914 Score = 91.5 bits (100), Expect = 5e-15 Identities = 96/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 3953 GGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCCACATTCCGGCTACGTCG 4012 |||||| | |||||| ||||||||||||||||||||||||| ||| ||| |||| Sbjct 180330 GGAAAGTGATAACTTTACTACCGCTGCGCTAAACGAAGTTGCCACTTTCAGGCATTGTCG 180271 Query 4013 GGTAGAAAAATAGTGTACATACCTCGGCCAG-AAAAAAGTAAAGCCTCAGACCACATGTT 4071 | |||||||| |||||||| ||| ||| |||| | || ||||| | | |||||||| Sbjct 180270 AGCGCTAAAATAGTATACATACC-CGGGCAGTAAAATATTACAGCCTTATATCACATGTT 180212 Query 4072 TGTT 4075 | || Sbjct 180211 TATT 180208 >seq592 Length=314331 Score = 91.5 bits (100), Expect = 5e-15 Identities = 109/147 (74%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 3926 TGATAACTTGTTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAA 3985 ||| ||| | ||| || | ||| |||||||| | |||||||| ||||||||||||| Sbjct 237512 TGAAAACATTTTTCCTTCT-TCCGGCCGGAAAGAGACAACTTTCCTTCCGCTGCGCTAAA 237454 Query 3986 CGAAGTTGCCACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAA 4045 |||| || |||| |||||||| | || |||||||||| ||| || |||| | | Sbjct 237453 CGAAATTCCCACTTTCCGGCTTAAACTGGCAGAAAAATAGCAAACACACATCGGATACTA 237394 Query 4046 AAAAGTAAAGCCTCAGACCACATGTTT 4072 |||| ||||||||| | | || |||| Sbjct 237393 AAAACGAAAGCCTCAAATCGCAAGTTT 237367 >seq1821 Length=306650 Score = 89.7 bits (98), Expect = 2e-14 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 3936 TTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCC 3995 ||||||| ||||| ||||||| || ||| | ||||| ||||| | ||||| Sbjct 290467 TTTTCTGTCCTCCGAATGGAAAGCTAAAATTTTTCTCCTGCTGCACTAAATTGAATTGCC 290408 Query 3996 ACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAA 4049 || |||||||| ||||||| |||||||||||| ||||| ||||| ||| ||||| Sbjct 290407 ACTTTCCGGCTCCGTCGGGCAGAAAAATAGTGAACATATCTCGGGCAGTAAAAA 290354 >SEQ58206 Length=343643 Score = 86.0 bits (94), Expect = 2e-13 Identities = 88/114 (77%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 3962 CAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCCACATTCCGGCTACGTCGGGTAGAAAA 4021 |||||||| |||||||||||||||| ||||||| |||||| ||||| | |||||| Sbjct 193139 CAACTTTCCTCTCGCTGCGCTAAACGAAATTGCCACTTTCCGGTGCCGTCGAGCAGAAAA 193080 Query 4022 ATAGTGTACATACCTCGGCCAG-AAAAAAGTAAAGCCTCAGACCACATGTTTGT 4074 ||| |||| || | | ||| |||||| ||||||| | | ||||| ||||| Sbjct 193079 GTAGCATACACACTTTGCGCAGTAAAAAAAGAAAGCCTTAAATCACATATTTGT 193026 >seq5031 Length=227743 Score = 86.0 bits (94), Expect = 2e-13 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 3936 TTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCC 3995 |||||||| |||| |||||| || || |||| || | ||||||||||| || | Sbjct 138336 TTTTCTGCGCTCCGAGCGGAAATCGACAGCTTTTCTCTCGTTACGCTAAACGAAATTATC 138277 Query 3996 ACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAG 4055 || ||| ||| || |||| ||||||||| | |||| ||||||| ||| || | |||| Sbjct 138276 ACTTTCTAGCTCCGGCGGGCAGAAAAATAATATACACACCTCGGACAGTAAGGAAGAAAG 138217 Query 4056 CCTCAGA 4062 ||||||| Sbjct 138216 CCTCAGA 138210 >seq3242 Length=251744 Score = 86.0 bits (94), Expect = 2e-13 Identities = 103/139 (74%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 3936 TTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCC 3995 ||||||| || || |||||| |||||||||| |||| | | |||||||||||||| Sbjct 146036 TTTTCTGTTCTAAATGTGGAAAGTGGCAACTTTCCTTCCGCAGTGATAAACGAAGTTGCC 145977 Query 3996 ACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAG 4055 || ||| |||| || | |||||||||| | | ||||||| ||| | ||| ||| Sbjct 145976 ACTTTCAGGCTTGGTTAAGCAGAAAAATAGCATGCTTACCTCG--CAGCATAAAAGAAAC 145919 Query 4056 CCTCAGACCACATGTTTGT 4074 ||||| | ||||| |||| Sbjct 145918 CCTCATATTACATGCTTGT 145900 >seq3362 Length=510382 Score = 84.2 bits (92), Expect = 8e-13 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 3952 CGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCCACATTCCGGCTACGTC 4011 ||||||| ||||||| |||| |||||||||||||||| || || ||||| ||| Sbjct 439452 CGGAAAGTTACAACTTTGCACACGCTTCGCTAAACGAAGTTGCAACTTTTCGGCTCCGTA 439393 Query 4012 GGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAGCCTCAGACCACATGTT 4071 ||| || ||||||| |||| |||| | ||| ||||| | || ||||||| | || ||| Sbjct 439392 GGGCAG-AAAATAGCATACACACCTTTGGCAGTAAAAA-TTAACCCTCAGATCTCACGTT 439335 Query 4072 TGT 4074 ||| Sbjct 439334 TGT 439332 >seq1774 Length=447725 Score = 84.2 bits (92), Expect = 8e-13 Identities = 103/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 3936 TTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCC 3995 |||||||| ||| | |||| | ||||||| |||||| ||| ||| || || | Sbjct 327278 TTTTCTGCACTCTGGGCAGAAAAGGACAACTTTTCTCCCGCTGTGCTCAACAAATTTTCT 327337 Query 3996 ACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAG 4055 || || ||||| || ||||||||||||| |||| | |||| || ||||| |||| Sbjct 327338 ACTTTTCGGCTCTGT---GTAGAAAAATAGTATACACATGTCGGGCACTAAAAAAGAAAG 327394 Query 4056 CCTCAGACCACATGTTTGTT 4075 ||||||| ||||||||||| Sbjct 327395 CCTCAGATAACATGTTTGTT 327414 >seq1552 Length=142394 Score = 84.2 bits (92), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 3936 TTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCC 3995 |||||| |||||| |||||| | ||||||| || |||| || ||||||||||| Sbjct 82803 TTTTCTACCCTCCGGGTGGAAAGTGACAACTTTTTTCCCTCTGC--TACACGAAGTTGCC 82746 Query 3996 ACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAG 4055 || || ||| ||| ||||||||||||| |||| | ||| | ||| ||| |||| Sbjct 82745 ACTTTTTAGCTTCGTTAGGTAGAAAAATAGCATACAGATCTCAGGCAGTTCAAA--AAAG 82688 Query 4056 CCTCAGACCACATGTTT 4072 |||||| ||||||||| Sbjct 82687 CCTCAGGTCACATGTTT 82671 >seq1682 Length=51659 Score = 82.4 bits (90), Expect = 3e-12 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 3974 CGCTGCGCTAAACGAAGTTGCCACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATA 4033 ||||| ||||| ||||||||||| |||||||| | | || |||||||||| |||| | Sbjct 11049 CGCTGTGCTAATCGAAGTTGCCAATTTCCGGCTCCATTTGGCAGAAAAATAGCTTACACA 11108 Query 4034 CCTCGGCCAGAAAAAAGTAAAGCCTCAGACCACATGTT 4071 ||||| ||| ||||| |||||| || | ||| |||| Sbjct 11109 TCTCGGGCAGTAAAAAAGAAAGCCACATATCACTTGTT 11146 >seq737 Length=415770 Score = 82.4 bits (90), Expect = 3e-12 Identities = 87/113 (77%), Gaps = 4/113 (4%) Strand=Plus/Minus Query 3963 AACTTTCGGGCCGCTGCGCTAAACGAAGTTGCCACATTCCGGCTACGTCGGGTAGAAAAA 4022 || |||| || ||||||||||||||| | ||||| ||| |||||| || | ||||||| Sbjct 199880 AATTTTCCTGCTGCTGCGCTAAACGAAATCGCCACTTTCTGGCTACATCCGCCAGAAAAA 199821 Query 4023 TAGT--GTACATACCTCGGCCAGAAAAAAGTAAAGCCTCAGACCACATGTTTG 4073 || | |||| ||||| | || | ||| |||||||| || |||||||||| Sbjct 199820 TAATAGGTAC--ACCTCAGGAAGTTACAAGCAAAGCCTCGGATCACATGTTTG 199770 >SEQ65495 Length=6217 Score = 80.6 bits (88), Expect = 9e-12 Identities = 91/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 3947 CCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCCACATTCCGGCT 4006 || |||| |||| | | ||||| || | ||||||||| || |||||| || ||||| Sbjct 4072 CCGTCCGAAAAGTGACCACTTTTCTACCACAGCGCTAAACTAAATTGCCATTTTTCGGCT 4013 Query 4007 ACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAGCCTCAGACCAC 4066 | |||| ||||||||||| ||||||||| ||| | ||| |||||| |||| ||| Sbjct 4012 GTGACGGGCAGAAAAATAGTATACATACCTGACGCAGTAGAAAAGAAAGCCCCAGATCAC 3953 Query 4067 AT 4068 || Sbjct 3952 AT 3951 >SEQ43196 Length=6983 Score = 80.6 bits (88), Expect = 9e-12 Identities = 100/134 (75%), Gaps = 5/134 (4%) Strand=Plus/Minus Query 3947 CCATCCGG---AAAGCGGCAACTTTCGGG-CCGCTGCGCTAAACGAAGTTGCCACATTCC 4002 |||||||| |||| | ||||||| ||||||| ||||| || ||||| | || | Sbjct 811 CCATCCGGTGAAAAGTGACAACTTTTTCTTCCGCTGCTCTAAAGTAAATTGCCCCTTTTC 752 Query 4003 GGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAGCCTCAGA 4062 | || |||| || ||||||||||| | | ||||||| | | ||| |||| ||||||| Sbjct 751 GCCTCCGTCAGGCAGAAAAATAGTAAAAACACCTCGGGCTGTCGAAA-TAAAACCTCAGA 693 Query 4063 CCACATGTTTGTTT 4076 ||| ||||||||| Sbjct 692 TCACGTGTTTGTTT 679 >seq8575 Length=130586 Score = 80.6 bits (88), Expect = 9e-12 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 3976 CTGCGCTAAACGAAGTTGCCACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACC 4035 ||||||||||||||| |||||| |||||||| |||| | |||||||||| |||| ||| Sbjct 67281 CTGCGCTAAACGAAGCTGCCACTTTCCGGCTTAGTCGAGCTGAAAAATAGTATACACACC 67340 Query 4036 TCGGCCAGAAAAAA 4049 |||| || ||||| Sbjct 67341 TCGGGTAGTAAAAA 67354 >seq5108 Length=241853 Score = 80.6 bits (88), Expect = 9e-12 Identities = 103/141 (73%), Gaps = 6/141 (4%) Strand=Plus/Minus Query 3937 TTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCCA 3996 ||||||||||||| ||| || ||||| || | ||| |||| |||| || || ||| Sbjct 83863 TTTCTGCCCTCCAACCGAAAGGCGGCTTATTCCAGGC---TGCGTTAAATAAAATTACCA 83807 Query 3997 CATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAGC 4056 | | | |||| ||| |||||| | |||| ||||||||||| ||| |||| ||||| Sbjct 83806 CTTCCAGGCTTCGTTGGGTAGTTAGATAGCACACATACCTCGGGCAGTAAAA---AAAGC 83750 Query 4057 CTCAGACCACATGTTTGTTTG 4077 |||| | ||||| || ||| Sbjct 83749 AGCAGATCTCATGTGTGCTTG 83729 >seq4496 Length=346241 Score = 80.6 bits (88), Expect = 9e-12 Identities = 87/114 (76%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 3936 TTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCC 3995 ||||||| ||| | | |||| | |||||||| |||||| |||||||||||| ||| Sbjct 5218 TTTTCTGTCCTG-AGGCTGAAAATGACAACTTTCCTCCCGCTGTGCTAAACGAAGTCGCC 5160 Query 3996 ACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAA 4049 || |||||| | || || |||||||| | ||| ||||||||||| ||||| Sbjct 5159 ACTTTCCGGATGTGTTGGCCAGAAAAATTGCATACTCACCTCGGCCAGTAAAAA 5106 >seq95 Length=355275 Score = 78.8 bits (86), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 3936 TTTTCTGCCCTCCATCCGGAAAGCGGCAACTTTCGGGCCGCTGCGCTAAACGAAGTTGCC 3995 ||||||| ||| ||||||| | || |||| |||||||||||||| | |||| Sbjct 180848 TTTTCTGATCTCTGGACGGAAAGTGATAAATTTCCTTCCGCTGCGCTAAACAACATTGCA 180789 Query 3996 ACATTCCGGCTACGTCGGGTAGAAAAATAGTGTACATACCTCGGCCAGAAAAAAGTAAAG 4055 || ||||| || ||| ||| || ||||| | ||| ||||||| || ||||| |||| Sbjct 180788 ACTTTCCGCCTCCGTTGGGCAG-AAAATGGCATAC--ACCTCGGGCATTAAAAAAGAAAG 180732 Query 4056 CCTCAGACCACATGTTTGT 4074 ||||| |||||||||| Sbjct 180731 GGTCAGATTACATGTTTGT 180713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17571083645325