Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value SEQ11636 100 3e-16 >SEQ11636 Length=47261 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || |||| ||| | ||||| || || |||||||| ||||| || || ||||| || ||| Sbjct 5705 TGTGCAATCATGTGGGTTAAAAGCGAGTAGCTGGCTATGTTGAAGGGTACTCCTAAGCCC 5646 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 | || | ||||| |||| | ||| || ||||| || | ||||||||| || || Sbjct 5645 AAATCAGCACTTCTCTGGTACATGTTACACGACAGCTCGCCATTAGCTACATAGAACTG- 5587 Query 20369 CATAACA-AGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACA 20427 || | | ||||||| || || || ||||| || || || || ||||||||||| Sbjct 5586 CACGAGACAGTGACATGGAGGTAGAGCCATTTTTTTTAAATCAGCTGGATTCCACGCACA 5527 Query 20428 CATAATGATTCTTCTATCGTGCGGATT 20454 || || ||||||||||| | ||||| Sbjct 5526 AATTATCATTCTTCTATCATTTGGATT 5500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441002273051560