Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value SEQ17521 113 5e-20 >SEQ17521 Length=26855 Score = 113 bits (124), Expect = 5e-20 Identities = 250/370 (68%), Gaps = 9/370 (2%) Strand=Plus/Minus Query 114285 CATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAG 114344 |||| || | ||||||||| || | || ||||| | ||||| |||||| || ||| || Sbjct 3271 CATCAGCTAAACCTTGGACTCCAATACCTATTGGTCTATGTCGCATATTGGAGTTTTTAG 3212 Query 114345 CGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 114403 | ||| | | |||||| |||| ||| |||| ||||||| |||| ||| | || Sbjct 3211 CT-TCTGGAACTGGATAATAATTGACATCTATAATTTTATTTAGGTTTTGGGTTATAATT 3153 Query 114404 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 114463 ||||| | ||| | | |||||| ||| | | | | || ||||| ||| || || Sbjct 3152 TTTGTAACTTCTTTTAACTTTTCAAAATTGTACGTTCTA---TCATCATTTACAAACATA 3096 Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTA 114521 | || || || || | |||||| || | ||||| || || ||||| |||| Sbjct 3095 TTCAAAGCAATAGAAGCTAAATTACATACTGCTACTTCATCTACTGAT--GTGTATTCTA 3038 Query 114522 TAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 114581 ||||| ||||| | ||| || ||||| || || | || || ||||| |||| Sbjct 3037 CTATTTCTGTACATAGATTACTACATTTAATTGTTCCTAGATTTTTCTGATTACTCTTTC 2978 Query 114582 TGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 114641 ||||||| | ||| ||||| | |||| |||| || || || || ||| | | | || Sbjct 2977 TGTTACATGAATCTTTGTATAACATGAATGGAGTGCCTGTTTCAACTTGTGCTTCTACAA 2918 Query 114642 TAGCCTTCCA 114651 |||||||||| Sbjct 2917 TAGCCTTCCA 2908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596852129119720