Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2092 185 7e-42 seq6616 170 1e-37 seq744 165 6e-36 seq1973 163 2e-35 seq5513 140 2e-28 seq173 125 5e-24 seq6523 122 7e-23 seq2028 120 2e-22 SEQ58356 113 3e-20 SEQ21942 104 2e-17 seq4515 104 2e-17 seq2744 102 6e-17 seq2773 96.9 3e-15 seq5442 91.5 1e-13 >seq2092 Length=257718 Score = 185 bits (204), Expect = 7e-42 Identities = 149/179 (83%), Gaps = 1/179 (1%) Strand=Plus/Plus Query 57314 TTAACACGTCCCTTGTGCATATATCATATGTGTGTCATTTTAGGGTTTACATGATACGCG 57373 ||||||||| || |||||||| | ||||||||| ||||| |||||||| ||||||| | Sbjct 227977 TTAACACGTTCCCTGTGCATACACCATATGTGTAGCATTTCAGGGTTTATATGATACATG 228036 Query 57374 CGTGCACCACCGATGATGCACAACCCCCCTGTTAAATTAATAGCTTGCCAGCTCTTACAC 57433 |||||||||| |||||||||| | ||||||||||| | ||| |||||| | |||||| Sbjct 228037 CGTGCACCACTGATGATGCACGA-CCCCCTGTTAACTAAATGGCTTGCTAAAATTTACAC 228095 Query 57434 GTGTGAGTTAGGCGTATTTTATTTGCATGCACATACCGGGTACGGTAATTTTGACAAAA 57492 |||| || ||| || ||||||||||||||||||||||| |||| ||||||| ||| || Sbjct 228096 GTGTAAGCTAGATGTTTTTTATTTGCATGCACATACCGGTTACGATAATTTTAACAGAA 228154 >seq6616 Length=340517 Score = 170 bits (188), Expect = 1e-37 Identities = 160/202 (79%), Gaps = 5/202 (2%) Strand=Plus/Plus Query 57291 CGAACAACCAAAAGTTTGTTATGTTAACACGTCCCTTGTGCATATATCATATGTGTGTCA 57350 |||||||| |||| | |||||| ||||| || ||||||| | ||| |||| || Sbjct 166763 CGAACAACAAAAAATA----ATGTTACCACGTTCCCTGTGCATGCACCATCGGTGTTGCA 166818 Query 57351 TTTTAGGGTTTACATGATACGCGCGTGCACCACCGATGATGCACAACCCCCCTGTTAAAT 57410 ||| |||||||| ||| |||| |||||||| || ||||| |||| | |||| |||||| | Sbjct 166819 TTTCAGGGTTTAAATGTTACGTGCGTGCACTACTGATGACGCACGATCCCC-TGTTAACT 166877 Query 57411 TAATAGCTTGCCAGCTCTTACACGTGTGAGTTAGGCGTATTTTATTTGCATGCACATACC 57470 |||| ||||||| | |||| |||| | ||| ||||||||||||||||||||||||| Sbjct 166878 TAATGGCTTGCCTAAATTGACACATGTGCGCTAGACGTATTTTATTTGCATGCACATACC 166937 Query 57471 GGGTACGGTAATTTTGACAAAA 57492 || | |||||||||||||| || Sbjct 166938 GGCTGCGGTAATTTTGACAGAA 166959 >seq744 Length=275138 Score = 165 bits (182), Expect = 6e-36 Identities = 151/186 (81%), Gaps = 5/186 (3%) Strand=Plus/Plus Query 57293 AACAACCAAAAGTTTGTTATGTTAA-CACGTCCCTTGTGCATATATCATATGTGTGTCAT 57351 || |||||| ||| | ||||||| ||||| ||||||||| | ||||||||| ||| Sbjct 13154 AAAAACCAATAGTAAG--ATGTTAAACACGTTGCTTGTGCATGCACCATATGTGTAGCAT 13211 Query 57352 TTTAGGGTTTACATGATACGCGCGTGCACCACCGATGATGCACAACCCCCCTGTTAAATT 57411 || |||||||| ||||||| ||||||||||| |||||||||| ||| | | ||||| || Sbjct 13212 TTCAGGGTTTATATGATACATGCGTGCACCACTGATGATGCACGACCGCAC-GTTAACTT 13270 Query 57412 AATAGCTTGCCAGCTCTT-ACACGTGTGAGTTAGGCGTATTTTATTTGCATGCACATACC 57470 ||| |||||||| ||| |||| |||||| ||| | | ||||||||||||||||||||| Sbjct 13271 AATGGCTTGCCAAAACTTGACACTTGTGAGCTAGACATTTTTTATTTGCATGCACATACC 13330 Query 57471 GGGTAC 57476 || ||| Sbjct 13331 GGCTAC 13336 >seq1973 Length=406541 Score = 163 bits (180), Expect = 2e-35 Identities = 134/162 (83%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 57314 TTAACACGTCCCTTGTGCATATATCATATGTGTGTCATTTTAGGGTTTACATGATACGCG 57373 ||||||||| || ||||||| | ||||||||| |||||||||||||| | |||||| | Sbjct 401346 TTAACACGTTCCCTGTGCATGCACCATATGTGTAGCATTTTAGGGTTTATACGATACGTG 401405 Query 57374 CGTGCACCACCGATGATGCACAACCCCCCTGTTAAATTAATAGCTTGCCAGCTCTTACAC 57433 ||||||||| |||||||||| | |||||||||| |||| |||||||| | |||| Sbjct 401406 TGTGCACCACTGATGATGCACGA--CCCCTGTTAATTTAAAGGCTTGCCATAATTGACAC 401463 Query 57434 GTGTGAGTTAGGCGTATTTTATTTGCATGCACATACCGGGTA 57475 ||||||| ||| ||| ||||||||||||| ||||||||| || Sbjct 401464 GTGTGAGCTAGACGTTTTTTATTTGCATGAACATACCGGCTA 401505 >seq5513 Length=124375 Score = 140 bits (154), Expect = 2e-28 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 7877 AGCAGCTTGCCGAAGCTGGATTATACTACACGGGCCGCGGTGATATGACAAAGTGTTTCT 7936 || |||| ||||||||||| || | |||||| || | || || | || || || |||| Sbjct 10796 AGGAGCTAGCCGAAGCTGGTTTCTTCTACACTGGTCAAGGAGACAAAACGAAATGCTTCT 10737 Query 7937 ACTGTGACGGGGGTCTCAAAGATTGGGAGGAAAACGATATACCGTGGGAGCAACACGCGC 7996 ||||||||| ||| | || |||||||| | ||||||| || ||||||||||| || | Sbjct 10736 TCTGTGACGGTGGTTTGAAGGATTGGGAAAATGACGATATTCCCTGGGAGCAACATGCAC 10677 Query 7997 GCTGGTTTGATAAATGCGCATATGTCAAACTAGTCAAAGGGGAGGAATATGTTCAGAAGG 8056 | ||||| ||| ||| || || ||| |||| |||||||| || |||||||| |||| Sbjct 10676 GTTGGTTCGATCGATGTGCCTACGTCCAACTTGTCAAAGGACGAGAGTATGTTCAAAAGG 10617 Query 8057 TAATTACTGAAGCGTGCGCCGT 8078 | || | |||||||| || || Sbjct 10616 TTATATCGGAAGCGTGTGCTGT 10595 >seq173 Length=72861 Score = 125 bits (138), Expect = 5e-24 Identities = 123/157 (78%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 57314 TTAACACGTCCCTTGTGCATATATCATATGTGTGTCATTTTAGGGTTTACATGATACGCG 57373 ||||||||| || ||||||| ||||||||||| ||||| |||||||| |||||||| | Sbjct 22506 TTAACACGTTCCCTGTGCATGCATCATATGTGTAGCATTTCAGGGTTTATATGATACGTG 22565 Query 57374 CGTGCACCACCGATGATGCACAACCCCCCTGTTAAATTAATAGCTTGCCAGCTCTTACAC 57433 | |||||| ||||| | | | ||||||||| | |||| ||||||| | |||| Sbjct 22566 CTGGCACCAGTCATGATACGCGA-CCCCCTGTTTACTTAACTTCTTGCCAAAATTGACAC 22624 Query 57434 GTGTGAGTTAGGCGTATTTT---ATTTGCATGCACAT 57467 || |||||||| ||| |||| |||||||||||||| Sbjct 22625 GTATGAGTTAGACGTTTTTTTTAATTTGCATGCACAT 22661 >seq6523 Length=87301 Score = 122 bits (134), Expect = 7e-23 Identities = 129/168 (77%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 57319 ACGTCCCTTGTGCATATATCATATGTGTGTCATTTTAGGGTTTACATGATACGCGCGTGC 57378 |||| || ||||||| | ||||||| |||| ||||||| |||||||| |||||| Sbjct 75297 ACGTTCCCTGTGCATGCACTGTATGTGT---ATTTCAGGGTTTGTATGATACGTGCGTGC 75241 Query 57379 ACCACCGATGATGCACAACCCCCCTGTTAAATTAATAGCTTGCCAGCTCTTACACGTGTG 57438 ||||| |||||||||| | || |||||||| |||| |||||||| | ||||| | Sbjct 75240 ACCACTGATGATGCACGA-CCTCCTGTTAATTTAACGGCTTGCCAAAATTGACACGAAAG 75182 Query 57439 AGTTAGGCGTATTTTATTTGCATGCACATACCGGGTACGGTAATTTTG 57486 || ||| || | |||||||||||||| |||||| || |||||||| Sbjct 75181 AGCTAGAAGTTTCTTATTTGCATGCACGTACCGGTAACAATAATTTTG 75134 >seq2028 Length=123119 Score = 120 bits (132), Expect = 2e-22 Identities = 138/182 (76%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 57314 TTAACACGTCCCTTGTGCATATATCATATGTGTGTCATTTTAGGGTTTACATGATACGCG 57373 || |||||| || ||| ||| | ||||||||| ||||| ||||||| || |||| | Sbjct 112965 TTGACACGTTCCCTGTACATGCAGCATATGTGTAGCATTTCAGGGTTTGTATTTTACGTG 113024 Query 57374 CGTGCACCACCGATGATGCACAACCCCCCTGTTAAATTAATAGCTTGCCAGCTCTTACAC 57433 || ||||| | ||||||||| |||| | |||||| |||| ||| |||| | |||| Sbjct 113025 CGGGCACCTCTAATGATGCACGACCCTC-TGTTAATTTAACGGCTCGCCAAAATTGACAC 113083 Query 57434 GTGTGAGTTAGGCGTATTTTATTTGCATGCACATACCGGGTACGGTAATTTTGACA-AAA 57492 ||||||| ||| | | | |||||||||||||| ||||| || ||||||||| | ||| Sbjct 113084 GTGTGAGCTAGACTT-TCTTATTTGCATGCACGTACCGTCAACAATAATTTTGAAAGAAA 113142 Query 57493 TC 57494 || Sbjct 113143 TC 113144 >SEQ58356 Length=38410 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| || |||||| | ||| | || ||| || ||||||||||| || ||| Sbjct 35040 CCTCCTCTTAACCTCAACACAAGATGCAATGTAGACTCCTTCTGAATATTGTAGTCGGAT 35099 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | || | || |||| ||| ||||| ||||| |||| || || ||||||| ||| Sbjct 35100 AATGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGGTGGA 35159 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||| || || ||| ||| ||||||| | | || || || ||||||||| Sbjct 35160 ATACCCTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATCGGAGGCCTCCACC 35219 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769 || | || || ||||| ||||| | ||||| || || |||||||| || Sbjct 35220 TCGAGGGTGATGGTTTTCCCCGTAAGGGTTTTCACGAATATCTGCATTGT 35269 >SEQ21942 Length=42535 Score = 104 bits (114), Expect = 2e-17 Identities = 318/489 (65%), Gaps = 2/489 (0%) Strand=Plus/Plus Query 27710 GCTTACTTTGTCGAGTGGGGTGTGTATGGTAGACAGTATCCGGCCAACAAACTACCCATA 27769 ||||| ||||| ||||||||||| || |||| | | || | | || ||||||| Sbjct 34607 GCTTATTTTGTGGAGTGGGGTGTTTACCCTAGAAAATTCCCAGTAGATAAGGTACCCATT 34666 Query 27770 CCAAATCTGACACATTTGCTGTACGGCTTTGTGCCCATTTGCGGCGGAGACGGTATCAAC 27829 || ||||| |||||| | || ||||| ||| | ||||| || ||||| ||||| || ||| Sbjct 34667 CCGAATCTTACACATCTTCTTTACGGATTTATCCCCATCTGTGGCGGTGACGGAATTAAC 34726 Query 27830 GATAGCCTAAAACAGATCCCCAATTCTTTTGAGGTCCTCCAAAAGTCATGCTCAAACCGA 27889 || || | ||| | ||| ||| | | | ||| || ||| ||| Sbjct 34727 GACAGTTTGAAAGAAATCGAAGGAAGTTTCCAAGCTTTGCAACGATCTTGCAGCGGGCGA 34786 Query 27890 GCCGACTTTAGTGTGAGCATACACGATATATGGGGCGCGCTGCAAAAACCGCAAAAGGGT 27949 | ||||| | || || ||||| |||| || | |||||||| || |||||| Sbjct 34787 GAGGACTTCAAAGTTTCTATCCACGACCCTTGGGCAGCTTTACAAAAACCACAGAAGGGT 34846 Query 27950 GTAGAGGCGTGGAACGAGCCGTACAAGGGTAACTTTGGCCAGTTGATGGCCATCAAACGA 28009 | | |||||||| || ||||| || |||||||| || ||||| | | |||| | Sbjct 34847 TTGTCCTCCTGGAACGAACCTTACAAAGGCAACTTTGGACAACTGATGTCTTTAAAACAA 34906 Query 28010 CACCATCCCCACCTATCCATACTGCCCTCGATTGGTGGGTGGACTCTGAGCGATCCATTC 28069 || | || | || || || || || || ||||| || ||||||||| Sbjct 34907 GCTAGACCTGATCTGAAGGTTCTTCCATCAATCGGGGGCTGGACATTGGCAGATCCATTC 34966 Query 28070 TTTTTTATGCACGACCCGGCCAAGCGTG-CCGTGTTTGTAGAGTCTGTGCGCGAATTTCT 28128 | || | | || || || | | ||| ||||| | || ||| || || || Sbjct 34967 TACTTCTTTGATGATAAGGTAAAAAGAGATCGT-TTTGTGGCATCAGTGAAAGACTTCCT 35025 Query 28129 GCAAACGTGGAAGTTCTTTGACGGAGTCGATTTGGACTGGGAGTTTCCGGGTGGAAAGGG 28188 ||||| ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct 35026 CCAAACTTGGAAATTCTTCGACGGTGTTGACATTGATTGGGAGTTCCCTGGTGGAAAAGG 35085 Query 28189 AGCCAAccc 28197 || || || Sbjct 35086 TGCTAATCC 35094 >seq4515 Length=80215 Score = 104 bits (114), Expect = 2e-17 Identities = 115/152 (76%), Gaps = 5/152 (3%) Strand=Plus/Minus Query 57341 ATGTGTGTCATTTTAGGGTTTACATGATACGCGCGTGCACCACCGATGATGCACAACCCC 57400 || ||| || || | | |||| || ||||| ||||||||||| | || ||||| ||| Sbjct 52369 ATCTGTTTCGGTTCATGATTTAAATTATACGTGCGTGCACCACTGGTGCTGCACGACC-- 52312 Query 57401 CCTGTTAAATTAATAGCTTGCCAGCTCTTACACGTGTGAGTTAGGCGTATTTTATTTGCA 57460 ||||||||||| |||||| | |||||||||| ||| ||| |||| ||||| Sbjct 52311 --TGTTAAATTAAAGGCTTGCTTAAAGTGGCACGTGTGAGCTAGACGT-TTTTGGTTGCA 52255 Query 57461 TGCACATACCGGGTACGGTAATTTTGACAAAA 57492 |||||||||||| |||| |||||||||| || Sbjct 52254 TGCACATACCGGCTACGACAATTTTGACAGAA 52223 >seq2744 Length=156805 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || ||| |||||||| || ||||| ||||| || | ||| | || || Sbjct 156778 ACCAAATGGAGTGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGTGTACGACCATCTTCA 156719 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||||||| ||||| || || | ||| || || | || | ||||| ||||| | Sbjct 156718 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGCGGGATACCCTCTTTGTCTTGA 156659 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 || || |||||| | | || ||||| | || ||||| | ||||| ||||| Sbjct 156658 ATTTTAGCCTTTACATTTTCAATAGTGTCTGAAGGTTCTACCTCTAGGGTAATAGTTTTG 156599 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || ||||||||||||||||| Sbjct 156598 CCAGTGAGTGTCTTTACAAAAATCTGCAT 156570 >seq2773 Length=85211 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| |||||||||||| ||||| ||||| || |||| | || |||| ||| Sbjct 67052 TGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAGAGGGTTCGCCCATCTTCCAGTTGC 66993 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || ||||| || ||||||||||| || | || | ||| |||||||| || || Sbjct 66992 TTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATTTTG 66933 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 ||| ||| | | | ||||| | || || |||| ||||| || ||||| || Sbjct 66932 GCTTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTAATGGTCTTTCCAGTA 66873 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | ||| || ||||| || ||||| Sbjct 66872 AGAGTCTTGACAAAGATTTGCAT 66850 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| ||||| |||||||| |||| | || |||| || || || ||||| Sbjct 67496 TCTTTTTGAATGTTGTAGTCAGATAGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAAG 67437 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || ||||||||||| || | || | ||| |||||||| || || ||| ||| Sbjct 67436 ATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTC 67377 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||| | || || |||| ||||| || ||||| || | ||| || ||| Sbjct 67376 TCAATTGTATCTGAAGGTTCTACTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTGACA 67317 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 67316 AAGATCTGCAT 67306 Score = 95.1 bits (104), Expect = 9e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||||||||||||||| ||||| || |||| | || |||| ||||| || ||||| Sbjct 67269 CTCTTTTTGAATATTGTAGTCAGACAGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAA 67210 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || ||||||||||| || | || | ||| ||||| || || || ||| ||| Sbjct 67209 GATAAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTATCCTGGATTTTGGCTTTGACATT 67150 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || | || || |||| ||||| || || ||||| | ||||| || Sbjct 67149 CTCAATTGTGTCCGAAGGTTCAACTTCCAAAGTAATGGTCTTGCCCGTTAGTGTTTTCAC 67090 Query 48755 AAAAATCTGCAT 48766 |||||| ||||| Sbjct 67089 AAAAATTTGCAT 67078 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 || || ||||| || ||||| || |||||||| ||||||||||| || | || | Sbjct 66836 CGTAATACCAAGTGAAGCGTAGATTCCTTTTGAATGTTGTAATCAGACAGTGTACGCCCA 66777 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || || | || || || ||||| || ||||||||||| || | || | ||| |||||| Sbjct 66776 TCTTCTAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTG 66717 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || || || ||| ||| | | | ||||| | || || |||| ||||| Sbjct 66716 TCCTGGATTTTGGCTTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTAATA 66657 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || |||| ||||| |||||||| ||||| Sbjct 66656 GTCTTGCCTGTCAGTGTTTTCACAAAAATTTGCAT 66622 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 || || ||||| || ||||| || |||||||| ||||||||||| || | || | Sbjct 66380 CGTAATACCAAGTGAAGCGTAGATTCCTTTTGAATGTTGTAATCAGACAGTGTACGCCCA 66321 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || || | ||| || || || || || || ||||| ||||| | || | || || ||| Sbjct 66320 TCTTCAAGCTGTTTCCCTGCGAAGATAAGACGCTGCTGATCGGGAGGGATACCTTCTTTG 66261 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || ||| || ||||||| | | | || || | ||| ||||||| || || Sbjct 66260 TCCTGAATTTTAGCTTTTACATTTTCAATTGTATCCGATGGCTCAACCTCCAAGGTTATG 66201 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||||| || | || || ||||| |||||||| Sbjct 66200 GTTTTTCCAGTGAGTGTCTTCACAAATATCTGCAT 66166 >seq5442 Length=246257 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 8992 TAATTAGTACCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCAGTCGTGGAAGTA 9051 || || || || ||||| ||||||||||| ||| | | || || || | | Sbjct 104765 TAGTTGGTTCCTGTTGAACCAAACCCTCCATCTGCTCTTTTAGTATCTGAAAGATTGGCT 104824 Query 9052 ACCTCTACCAGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCC 9111 || || | ||| ||| || | |||| |||||| |||| ||||||||| || || || Sbjct 104825 ACTTCCATCAGCTCGGGGTAGTAAATTTTTTCACATATTAGTTGAGCAATTCTATCACCT 104884 Query 9112 TTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTG 9171 || || || |||||||| || || |||||||| | || ||||| || || || || Sbjct 104885 TTTTTAACCACAAAGTCATCATCTGAGTGATTGAATAATACAACTCCAACATTTCCTCTA 104944 Query 9172 TAATCCTCATCGATCACACCAGC 9194 ||||| ||||| || |||||||| Sbjct 104945 TAATCTTCATCTATGACACCAGC 104967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380625802455357