Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq49 93.3 5e-14 >seq49 Length=523143 Score = 93.3 bits (102), Expect = 5e-14 Identities = 129/177 (73%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 193433 TCAGTTACGTATACCTGAAATAGGGGATAAATTTTGTTCA-GGAATGGCCCAAAAAGGAA 193491 ||||| ||| || ||| |||| || || |||||| ||| || |||| | ||||||||| Sbjct 388676 TCAGT-ACGCATTCCTCAAATTGGTGACAAATTTGCCTCAAGGCATGGAC-AAAAAGGAA 388733 Query 193492 CTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAG 193551 |||||||||| || ||||||||| ||||| |||||| | ||| | ||| | Sbjct 388734 CTTGTGGTATCCAGTACAGACAAGAAGACATGCCCTTTACATGTGAAGGGCTCACACCGG 388793 Query 193552 ATATTATTATTAATCCAAATTGTATTCCATCCAGAATGACCATTAATCAAATTATTG 193608 |||| || || |||||| || ||| |||||| | ||||| ||| ||| | |||| Sbjct 388794 ATATCATCATCAATCCACATGCTATCCCATCCCGTATGACAATTGGTCACTTGATTG 388850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634644376344520