Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq49 84.2 3e-11 >seq49 Length=523143 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/177 (72%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 192986 TCAGTTACGTATACCTGAAATAGGGGATAAATTTTGTTCG-GGAATGGCCCAAAAAGGAA 193044 ||||| ||| || ||| |||| || || |||||| || || |||| | ||||||||| Sbjct 388676 TCAGT-ACGCATTCCTCAAATTGGTGACAAATTTGCCTCAAGGCATGGAC-AAAAAGGAA 388733 Query 193045 CTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAG 193104 |||||||||| || ||||||||| ||||| |||||| | ||| | ||| | Sbjct 388734 CTTGTGGTATCCAGTACAGACAAGAAGACATGCCCTTTACATGTGAAGGGCTCACACCGG 388793 Query 193105 ATATTATTATTAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTG 193161 |||| || || |||||| || ||| || ||| | ||||| ||| ||| | |||| Sbjct 388794 ATATCATCATCAATCCACATGCTATCCCATCCCGTATGACAATTGGTCACTTGATTG 388850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628003555914240