Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq3468 107 2e-18 >seq3468 Length=231908 Score = 107 bits (118), Expect = 2e-18 Identities = 111/142 (78%), Gaps = 5/142 (4%) Strand=Plus/Minus Query 89289 GGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGGATATATCAAAGCCCCTT 89348 || ||||| ||||| ||| |||| || ||| | ||||||||| | |||||||| || Sbjct 113887 GGAATATGTGACAATTTATTAACAAGTACAGTCCGTGCATGGGATCTTTCAAAGCCACTA 113828 Query 89349 ATTTTTTGTCCTGCCATGAATACTCTAATGTGGGAACATCCTATTACT--GAATCACAAA 89406 | ||||||||||||||||| || | |||||||||||||||||||||| ||| ||||| Sbjct 113827 CTGTTTTGTCCTGCCATGAACACACGAATGTGGGAACATCCTATTACTTCGAA--ACAAA 113770 Query 89407 TAGATACTCTTAAACATATGGG 89428 || | ||| ||| | ||||| Sbjct 113769 TATCAATTCTAAAAGA-ATGGG 113749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602674437258160