Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value SEQ58105 114 1e-20 >SEQ58105 Length=99015 Score = 114 bits (126), Expect = 1e-20 Identities = 81/93 (87%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 5042 TAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAAT 5101 |||||| |||||||||||||||||||| || ||||| |||||||||||||| |||||| Sbjct 16163 TAAATCCACTTCTTCAACAGTCCAAAAGGAAGCTTCGGCTTTTTTGTACATTTCCCAAAT 16104 Query 5102 ATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 ||| |||||||| || |||| ||| |||||||| Sbjct 16103 ATCTGGATACTGGATAGGAAATATAACAAATCT 16071 Score = 98.7 bits (108), Expect = 8e-16 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 4816 GAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCT 4875 |||| || ||||| |||| |||| ||||||||||| || | |||||| || || || | Sbjct 16461 GAATGTATGTGTCAATTAATAGGGAGTACATTTCAGAGTGAACATTTTCCATGGCTATTT 16402 Query 4876 GAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTA 4935 | || || || ||| |||| || || || |||||||| || | |||||| || |||| Sbjct 16401 GGAACCCATAGAAGAATCTGGCCTCAGTAACTTGAACCTCTTGTGAAAATCGCTCCACTA 16342 Query 4936 AGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATG 4984 ||||| || || || || ||| || |||||||| || | ||| || Sbjct 16341 GATTTTCATTGACAATTCCATCAGATGCAGCAAAAAATGCTAGAACGTG 16293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426700059768947