Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_001884.1 Length=134416 Score E Sequences producing significant alignments: (Bits) Value seq70772 89.7 4e-13 >seq70772 Length=1643 Score = 89.7 bits (98), Expect = 4e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 32683 ATGATCTTCTTGACGTAATTCTGTGTTTCTTTAAAAGGAGGGATACCACCATATTTAATT 32742 ||||| || || ||||| || | ||||||||||||||| |||| ||| |||||||| | Sbjct 986 ATGATTTTTTTAACGTATTTTTTTGTTTCTTTAAAAGGGGGGACACCTCCATATTTTCTC 927 Query 32743 ACGTTACCAGGCCCAGCATTATATGCAGCCAA 32774 || ||||| | |||||||||||||| ||||| Sbjct 926 ACATTACCCGCACCAGCATTATATGCCGCCAA 895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428493849262952