Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq11950 109 5e-19 >seq11950 Length=2906 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||||||||| || || || ||||| ||||| || | ||| ||| || Sbjct 660 AATGCAAATTTTTGTCAAGACCCTTACTGGAAAGACCATCACTCTTGAAGTTGAGGCCTC 719 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| | || || || ||| || || || || | ||| ||||| Sbjct 720 AGACACCATTGAGAACGTCAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCAGATCA 779 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | || |||| || ||||| || |||| || | ||| || |||| ||||| Sbjct 780 GCAGCGTCTCATTTTCGCTGGCAAGCAGCTAGAGGACGGTCGCACCCTGTCCGACTATAA 839 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||||| ||||||||| | || |||| |||||||| ||||||||| Sbjct 840 CATTCAAAAGGAGTCTACTCTTCACTTGGTTCTGAGATTGAGAGGAGGAA 889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423847849289920