Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq11950 86.0 4e-12 >seq11950 Length=2906 Score = 86.0 bits (94), Expect = 4e-12 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||| ||| | |||||||||||||| |||||||| |||||| ||| | |||| | Sbjct 92 ACCAGCAGCGTCTTATCTTTGCTGGAAAACAACTGGAAGATGGTCGTACTCTTTCCGACT 151 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGT-ATTACGTTTACGAGGAGGA 22061 ||||||||||||||||||| || |||||| | || ||| | || ||||| ||| Sbjct 152 ACAATATTCAGAAGGAATCGACCCTTCATCTTGTCCTTAGGCTT-CGAGGTGGA 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356865093330064