Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_013691.1 Length=74901 Score E Sequences producing significant alignments: (Bits) Value seq282581 91.5 7e-14 >seq282581 Length=1216 Score = 91.5 bits (100), Expect = 7e-14 Identities = 229/348 (66%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 37627 CACCTTTGACTCCGGTACGCCGCCCGCTGTGAAGCAGATGCGGCACAAACTGCTGATGGC 37686 || ||| ||||| || || ||| |||||||||||| | || |||| || ||| |||| Sbjct 699 CATCTTCGACTCAGGAACCGGGCCTGCTGTGAAGCAGCTTCGATACAAGCTCCTGTTGGC 640 Query 37687 TAACGCCGGTGCAGTCAACCTGGTGATCGACGAGATCGGATCGAACCTCACTGGTCAGAT 37746 || ||| | ||||| | ||| || |||||||| || ||||| || | | Sbjct 639 CAAGAATGGTTCGATCAACTTCCAGATGGATGAGATCGGTTCCAACCTTCAAGGCAACAC 580 Query 37747 CGAAGTGCTGAACACTTTCCTCGAACTCTACGACGTGGGCGCCATCAAGCAAAAACTGGT 37806 |||||||| ||||| | || || || ||||| | || ||||| || || || Sbjct 579 TGAAGTGCTCAACACACTTCTGGAGCTATACGATCTTGGTAAAATCAAAGCCAAGCTCGT 520 Query 37807 GAAGAACACGCAGGACAACGTTCGAGGCGAGGAGATCCGTGGCAAGACGCCTACCAACAT 37866 || || || | |||||| | || || ||| ||| || ||| ||| | ||| | Sbjct 519 AAAAAATACCCCGGACAATGAACGGGGTATGGACATCGTGGGTTCGACACCTTCGAACGT 460 Query 37867 GATGCTGTTCGGTACTCCGACCAAGCTGCTCAACGGCAGTAAGACGGAGGAGGAATTCAA 37926 || ||||||| || | ||||| | |||| ||| | |||||||| || | Sbjct 459 ATTGATGTTCGGCACCAGCTCAAAGCTCTTTGACGGTGCTAAAATTGAGGAGGAGTTTTA 400 Query 37927 CTCCATGCTGGAAACTGGTTACGCTCGCCGGTCCTTCTTCGGACTCGG 37974 |||| | ||| || ||||| ||||| || | |||||||| |||| Sbjct 399 CTCCTTCTTGGCGACGGGTTATGCTCGACGCTGTTTCTTCGGGATCGG 352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238715751531312