Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_014595.1 Length=170605 Score E Sequences producing significant alignments: (Bits) Value seq211042 109 6e-19 >seq211042 Length=4981 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 53013 GTCATGGTTGCTTTCCGGCCGCAATGGCAGACGCCCTTTAATTCAACCAGTTTATCCGAA 53072 ||||| || ||||| || || || ||| ||| || | |||| || ||||||| | Sbjct 1371 GTCATTGTCGCTTTGCGCCCACAGCTGCAAACGGTTTTGAGTTCAGATAGCTTATCCGCA 1312 Query 53073 ATAGCCAGAAGTCTGGCCGAACCGGGAAATAATTGACCCCGAAAATCTGTTCTTAACCCG 53132 | |||| | ||||| ||||||||||| | | ||| ||||||| ||||||| || Sbjct 1311 ACGGCCAATAATCTGGATGAACCGGGAAAAAGCTCACCTTGAAAATCCGTTCTTATGCCA 1252 Query 53133 TAACACATAACGGGGATATTGTAATTATCAACCACTTGAGCTAACTGGTCAATTTGCTCT 53192 |||| | ||| || | ||| | |||||| || |||| | || || | ||||||| Sbjct 1251 AAACATAAAACCGGCACATTCAGCTCATCAACAACCCGAGCGAGCTCATCGACTTGCTCT 1192 Query 53193 GGTAACAAAAATTGAGCTTCATCGACCAGGACACA 53227 | | || ||||||||||||||| |||| |||||| Sbjct 1191 CGCACCAGAAATTGAGCTTCATCAACCAAGACACA 1157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543838888478400