Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_015466.1 Length=62668 Score E Sequences producing significant alignments: (Bits) Value seq214504 91.5 6e-14 >seq214504 Length=2501 Score = 91.5 bits (100), Expect = 6e-14 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 3945 GTTGAGGGAACCCAGGAGACACGCACCATTCGGCGGAAGCGGTTGCTCCCCACAGGGGTT 4004 ||||| || |||| | ||| ||||||| || || | |||||||||||||||||||| Sbjct 1403 GTTGATAGATCCCAACAAACAGGCACCATAAGGTGGCAATGGTTGCTCCCCACAGGGGTT 1344 Query 4005 GGTCGCAGCGATCGTCTCGCAATAATAGAGGTTGTTCATCCGGTTGATGGTGTCGATGAA 4064 || || || || |||||||||||| ||||||||| | | ||||| ||||||||| Sbjct 1343 TGTTGCCGCAATGCTCTCGCAATAATGCAGGTTGTTCTTTTGATTGATACGGTCGATGAA 1284 Query 4065 CAAGACGCCAGGGTCTGC 4082 | || || || || || Sbjct 1283 AATCACACCTGGTTCGGC 1266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199707846472904