Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_018281.1 Length=43581 Score E Sequences producing significant alignments: (Bits) Value seq9132 84.2 6e-12 >seq9132 Length=11495 Score = 84.2 bits (92), Expect = 6e-12 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 36984 ATCGCACTATCTCAATTAAGTAGAGGCGTAGAAAGTCGTAGTGAT-AAACGTCCGATGAT 37042 || ||||||||||| | | ||| || | ||| || ||| | ||||| || || || Sbjct 8063 ATTGCACTATCTCAGCTTAACAGAAGCTTGGAACAACG-AGTAAACAAACGCCCTATCAT 8121 Query 37043 GTCTGATTTAAGAGAAGCAGGAGGAATTGAGCAAGACGCGAATATGATTTTCTTCTTATA 37102 |||||||||||||||| | |||| ||||||||||||||| |||| || | ||| | || Sbjct 8122 GTCTGATTTAAGAGAATCTGGAGCAATTGAGCAAGACGCTGATATTATCATGTTCATCTA 8181 Query 37103 CCGTG 37107 ||||| Sbjct 8182 CCGTG 8186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138860046153456