Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_018282.1 Length=61167 Score E Sequences producing significant alignments: (Bits) Value seq214504 100 1e-16 >seq214504 Length=2501 Score = 100 bits (110), Expect = 1e-16 Identities = 120/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 6596 GATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGTGCTGTTCATCGACGCGATCAA 6655 ||||||||||| ||| | |||| || || || || ||| | ||||||||| ||||| Sbjct 1241 GATCATGCGCGCGACATATGATTATGCCGAACCAGGTGTGATTTTCATCGACCGTATCAA 1300 Query 6656 CCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGCCACCAACCCCTGCGGTGAGCA 6715 | | ||||||||| || ||||||| ||| || || || |||||||| || ||||| Sbjct 1301 TCAAAAGAACAACCTGCATTATTGCGAGAGCATTGCGGCAACAAACCCCTGTGGGGAGCA 1360 Query 6716 ACCCCTCCCGCCCTACGGTGCCTGTCTCCTGGGCTCCTTCAAC 6758 ||| | || || || ||||||||| | |||| || ||||| Sbjct 1361 ACCATTGCCACCTTATGGTGCCTGTTTGTTGGGATCTATCAAC 1403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194942373316368