Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_019455.1 Length=37151 Score E Sequences producing significant alignments: (Bits) Value seq270218 93.3 1e-14 >seq270218 Length=1533 Score = 93.3 bits (102), Expect = 1e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 35539 TAAACAAGCTCCATTGCCTTTTATCGGGCAAAAAAGAATGTTCTTAAAGCATTTTAGTCA 35598 |||| |||| ||| | || ||| | || |||||| | | || | ||||| | || ||| Sbjct 204 TAAAAAAGCACCAATCCCGTTTGTGGGCCAAAAACGTAATTTTGTGAAGCACTATA-TCA 262 Query 35599 AATT-TTAAATGATAATATCGACGGTAACGGCGAAGGCTGGACGATTGTAGATGTGTTTG 35657 | | |||||||| | || | || | || |||| ||||| ||||| |||| ||||| Sbjct 263 ATGTATTAAATGAACACATAAAAGGAGATGGAAAAGGATGGACCATTGTTGATGCGTTTG 322 Query 35658 GTGGTAGCGGTTTGTTATCTCATACCGCCAAACAACTCAAGCCACAAGCAAGGGTAATTT 35717 ||||||| ||||||||| |||| | |||| | || || |||| || |||| Sbjct 323 GTGGTAGTGGTTTGTTAAGTCATGTTTCAAAACGTATTAAACCGGCTGCAAATGTCATTT 382 Query 35718 ACAACGATTTTGATAATTATGCCGAGCGTTTACAACATAT 35757 | || ||||||||| ||||| | ||| | || | ||||| Sbjct 383 ATAATGATTTTGATCATTATACTGAGAGACTAAATCATAT 422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118354566586896