Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_019457.1 Length=44492 Score E Sequences producing significant alignments: (Bits) Value seq286592 86.0 2e-12 >seq286592 Length=622 Score = 86.0 bits (94), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 10905 CTCGATGCCCAATATTTCGGATTGGCCCAACGACGCAAGCGTGTGTTTGTTGTCGCAAGT 10964 |||||||| ||||||||||| | |||||||||| | | || ||| ||||||||||| Sbjct 3 CTCGATGCTCAATATTTCGGCGTACCCCAACGACGGCAAAGAGTCTTTCTTGTCGCAAGT 62 Query 10965 GCTCGAA---AAGGATTCGATCCCGCAGAAGTATTATTTGAGCGCGAAGGCGTGCGAAGG 11021 | ||| | ||| | ||||||||| || |||| |||||| |||||||| | || Sbjct 63 TTTGGAACCGATGGACTTGATCCCGCAAAAATATTGTTTGAGTCAAAAGGCGTGTGCGGG 122 Query 11022 GATTCTGCGCCGAGCCGAGAAGCGTTGCAAGAA 11054 ||| | | ||| | | |||||| |||| || Sbjct 123 AATTTTACACCGCGTGAAAAAGCGTGGCAAAAA 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141765254844768