Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08]
288,616 sequences; 398,147,594 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq28030 95.1 2e-14
seq182767 87.8 3e-12
>seq28030
Length=5412
Score = 95.1 bits (104), Expect = 2e-14
Identities = 125/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 25864 GCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGT 25923
||| | ||||| ||||| | |||| ||||| || ||||| || || || ||| |||
Sbjct 1707 GCTTCCTTTGGAGAGCGAATCATAGCTTTTGCGGCCGTGGAAGGGATTTTCTTCTCCGGG 1648
Query 25924 TCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTC 25982
|| ||||| |||| |||||||| ||| || | |||| |||||| ||||| || ||
Sbjct 1647 TCCTTTGCTTCCATTTTCTGGCTGAAGAAGC-GTGGACTCATGCCTGGGCTCACGTTCTC 1589
Query 25983 CAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCT 26033
||||| ||||| | ||||| || || |||| ||| |||||||||||
Sbjct 1588 TAACGAACTCATTTCTCGTGACGAAGGGCTTCACACAGACTTTGCCTGCCT 1538
>seq182767
Length=2084
Score = 87.8 bits (96), Expect = 3e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
|||||| || ||||| || || ||||| || | | ||| | ||| || ||| | |
Sbjct 1692 GTTCACGACCTGGAACTCCCCAGAGAGGACACGTCGGGAGTAGATGTTGGAGGTGTAGGC 1633
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
||||||| ||||||||| |||||||| || |||||| ||| ||||||||||| ||||
Sbjct 1632 CTCGATGCCCTCGTTGTTCCCCAGGATTTGTGCCGTGGAGGCCGTGGGCATGGGCGCCAA 1573
Query 221236 CAGCAGACTGTTGCGCAGTCC 221256
|| || |||||| || ||
Sbjct 1572 GAGAAGGGAGTTGCGGAGGCC 1552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 925493806615040
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |