Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_019518.1 Length=44485 Score E Sequences producing significant alignments: (Bits) Value seq286592 89.7 1e-13 >seq286592 Length=622 Score = 89.7 bits (98), Expect = 1e-13 Identities = 112/153 (73%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 10506 CTCGATGCCCAATATTTCGGACTGGCCCAACGACGCAAGCGTGTGTTTGTTGTCGCAAGT 10565 |||||||| ||||||||||| | |||||||||| | | || ||| ||||||||||| Sbjct 3 CTCGATGCTCAATATTTCGGCGTACCCCAACGACGGCAAAGAGTCTTTCTTGTCGCAAGT 62 Query 10566 GCTCGAA---AAGGATTTGATCCCGCAGAAGTATTATTTGAGCGCGAAGGCGTGCGAAGG 10622 | ||| | ||| ||||||||||| || |||| |||||| |||||||| | || Sbjct 63 TTTGGAACCGATGGACTTGATCCCGCAAAAATATTGTTTGAGTCAAAAGGCGTGTGCGGG 122 Query 10623 GATTCTCCGCCGAGCCGAGAAGCGTTGCAAGAA 10655 ||| | | ||| | | |||||| |||| || Sbjct 123 AATTTTACACCGCGTGAAAAAGCGTGGCAAAAA 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141742931616624