Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_019722.1 Length=41351 Score E Sequences producing significant alignments: (Bits) Value seq221573 96.9 9e-16 >seq221573 Length=809 Score = 96.9 bits (106), Expect = 9e-16 Identities = 255/385 (66%), Gaps = 16/385 (4%) Strand=Plus/Minus Query 14050 GAAACGAGACCCGCAATGGCTGAACAATACCTACACGGCGCAGAAGTCGTCGAAATTGAT 14109 |||| || |||| |||| |||| |||| | | ||||||| || ||||||||||| ||| Sbjct 421 GAAAGGAAACCCA-AATGCCTGAGCAATTCTTTCACGGCGTCGAGGTCGTCGAAATCGAT 363 Query 14110 AATGGGGCCCGCCCCATCCGCA----CCGCTCAAAGTGGTGTGATTGGTTTGGTGGGGAC 14165 | || |||| ||||| | | |||||| |||||| ||| | || || || Sbjct 362 ACCGGCACCCGGCCCATTCAAACTGTCCGCTC----CTCTGTGATCGGTCTTGTCGGCAC 307 Query 14166 GGCACCGGATGCCGATGCCACCGCCTTTCCTCTGAATACGCCGGTACTGATTGCCGGTAG 14225 || || |||| |||| | ||||| || || ||||| || |||| || |||| Sbjct 306 CGCGCCCAATGCGGATGGTGACAAATTTCCACTTAACACGCCAGTTTTGATCGCGGGTAA 247 Query 14226 CCGCCGAGAAGCGGCCAAGCTGGGCGCAGGTGGTACATTGCCACAGGCAATTGATGGCAT 14285 ||| || || || ||||| || | || || ||||| || ||||||| | Sbjct 246 GCGCACCGAGGCCGCTAAGCTTGGTCTTGTCGGCACCTTGCCCGGTGCCATTGATGATGT 187 Query 14286 TTTTGACCAGACAGGCGCAGTTGTGGTGGTGATTCGTGTGGATGAGGGCG---TGGATAG 14342 |||||||| | |||||| | | | ||| | || || |||||||| |||| Sbjct 186 CTTTGACCAAGCTGGCGCAATCATTATTGTGGTGCGGGTCTCTGAGGGCGCAACGGAT-- 129 Query 14343 CGCGGCCACTCA-ATCCAACGTGATCGGCAAAGTGGATGCCGACACCGAGCAGTACACCG 14401 || | || || ||||| ||||||||| || ||| |||| || ||||| | | Sbjct 128 -GCCGAGACACATTTCCAATGTGATCGGCGGCGTTGATCCCGATACTGAGCAACGCTTGG 70 Query 14402 GCATTCTGGCGCTGCTGTCTGCCGA 14426 |||||| |||||| || |||||| Sbjct 69 GCATTCAGGCGCTCCTTGATGCCGA 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131748503473296