Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_020203.1 Length=37095 Score E Sequences producing significant alignments: (Bits) Value seq273771 98.7 2e-16 >seq273771 Length=2308 Score = 98.7 bits (108), Expect = 2e-16 Identities = 136/184 (74%), Gaps = 10/184 (5%) Strand=Plus/Minus Query 20968 ACCGTGGGCGTAAAACGTACCGACATCGAGGACGACAACCTCGGCGTCTACGGACCGCTC 21027 ||||| ||||| | || | ||||||||||||||| ||||||||| |||| | ||| || Sbjct 2305 ACCGTTGGCGTCGATCGCAACGACATCGAGGACGATAACCTCGGCATCTATGCACCTCTG 2246 Query 21028 ATGCAGGAAATGGGGCGCGCTGCCGGCGC-GCATCCCGACGAGCTGGTCTTCGCCC---- 21082 | |||||||| ||| || | | |||| ||| || ||||| ||| ||| | | Sbjct 2245 TTTCAGGAAAT-GGGATCGTCGGCCGCGCAGCAGCCTGACGATCTGACCTTTGGGCTTGT 2187 Query 21083 TGCTCAAGGCCGGCAACGCCAATCTCTGCTACGACGGTCAAAACTTCTTCGACACCGATC 21142 ||| || |||| |||| ||| | |||||| ||||| || | ||||| |||||||||| Sbjct 2186 TGCCCAGGGCC-GCAA--CCAGAC-CTGCTATGACGGCCAGTATTTCTTTGACACCGATC 2131 Query 21143 ACCC 21146 |||| Sbjct 2130 ACCC 2127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118175980761744