Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_020484.1 Length=147284 Score E Sequences producing significant alignments: (Bits) Value seq288392 86.0 6e-12 >seq288392 Length=647 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 130793 GTTGTAGGCACAGGTAACAAAGTAGAAGATTTTGGTGTAGGTTTCTATACTAAGTATGGT 130852 |||| ||||| ||||| || || ||||||||||| || ||||| || || || |||||| Sbjct 304 GTTGCGGGCACGGGTAATAAGGTTGAAGATTTTGGCGTCGGTTTTTACACAAAATATGGT 363 Query 130853 GATGGTGGTGTTGATATATCACCTATTGCAGATTGTATGAAAACAGATGT 130902 || ||||| |||||||| || ||||| || ||||||||||| || Sbjct 364 GACGGTGGCGTTGATATCAGTCCCATTGCCGACCTCATGAAAACAGAAGT 413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 469480921027840