Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_020840.1 Length=38987 Score E Sequences producing significant alignments: (Bits) Value seq156640 82.4 2e-11 >seq156640 Length=3399 Score = 82.4 bits (90), Expect = 2e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11369 CATTGAATGGACTGACCACACGTTTAACCCCTGGGAGGGCTGCCAGAAGGTGGGACCCGG 11428 |||||||||||| ||||||||||||||||| ||| || ||| ||||| | ||| Sbjct 1721 CATTGAATGGACAGACCACACGTTTAACCCGTGGATTGGTTGCACAAAGGTTAGCGCCGC 1780 Query 11429 GTGTGACAATTGCTATGCCGAGGCG 11453 ||||||| |||||||||| |||||| Sbjct 1781 GTGTGACCATTGCTATGCGGAGGCG 1805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124209630425808