Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_021788.1 Length=145865 Score E Sequences producing significant alignments: (Bits) Value seq55518 931 0.0 seq218925 367 1e-96 seq55517 311 8e-80 seq91464 187 2e-42 seq55513 105 6e-18 >seq55518 Length=4844 Score = 931 bits (1032), Expect = 0.0 Identities = 1326/1859 (71%), Gaps = 39/1859 (2%) Strand=Plus/Minus Query 4662 TAGAAAAAGTTGTGTAATAGATATAGAAAGTAATGGTTTTACAGAAAACCTTATGGATTT 4721 || || |||| || || ||||||||| ||||| ||| ||||| || ||| |||| || Sbjct 1824 TAAAAGAAGTGCAGTTATTGATATAGAATCTAATGATTTCACAGAGAATCTTTTGGACTT 1765 Query 4722 TTCCTCTTTTCCTTATAAATTTGGAGGAGAGGCTAAACTGTGGTGTATTGTAATTAGGGA 4781 ||| || || || |||||||| | | || | || ||||| |||| ||||| || Sbjct 1764 TTCTTCGTTCCCATATAAATTCTTACCTAAAGCAAGCCTTTGGTGCGTTGTTATTAGAGA 1705 Query 4782 TTTAGACTCTGGTGAAGAAAAATTTGCAGAGTTAAAAGATGTAACCAAAGAATGGGTTAA 4841 |||||| |||| || || |||||||| ||| |||||||||| ||||||||| | | Sbjct 1704 TTTAGATACTGGAGAGGAGTGGTTTGCAGAATTAGAAGATGTAACTAAAGAATGGATGGA 1645 Query 4842 AGAAGCTTTAGAAGAGTTTTACTTTATTATAGCCCATAATGGCATTAAGTTCGATTTTGT 4901 |||| || || | ||||||| ||||| || || || || ||||| || ||||| | Sbjct 1644 AGAAACTCTAAAGCCATTTTACTACATTATTGCACACAACGGAATTAAATTTGATTTACT 1585 Query 4902 CCAAATGTTTTTGTTTGGTATTTTAGAATACACTGTTAGTTACAGAAAAGACGATCCTGA 4961 ||| | || || ||||| | |||||||| | || |||| | || || ||||| Sbjct 1584 TCAATTATTATTATTTGGAGTATTAGAATATAAAGTAGGTTATTTA---GATGAGCCTGA 1528 Query 4962 TACTATATTCGGGAGAGAGTGTAAATTCTTAGATAGTCTTATTCTTTCAAGATTAGCTAA 5021 |||| |||| || ||||| ||| | ||||||||| | || ||||| ||||||| || Sbjct 1527 TACTGTATTTGGAAGAGAATGTCGTTGGTTAGATAGTTTAATACTTTCTCGATTAGCAAA 1468 Query 5022 TCCAGATAGATTAGGGCACTCTTTAGCTGATTGGGGTAGAAGAGTCGGAGAACCAAAAGA 5081 ||| || ||| || ||||||||||| |||||||||||||| ||||||| ||||| Sbjct 1467 TCCTGACAGAGGGGGTCACTCTTTAGCAATGTGGGGTAGAAGAGTAGGAGAACTTAAAGA 1408 Query 5082 TTTATATAGACAACAATGTATAGAGGCAGGATATATCTTAAAAACAGAT---CCTAAAGG 5138 || ||||||||||||||||| || || ||||| | | | |||| ||| | || Sbjct 1407 CGATTACAGACAACAATGTATAGAAGCTGGGTATAT---AGATAAAGATGCGCCTGACGG 1351 Query 5139 AGAGGAGTTTAAGAAGTGGAACCCTTTAATGTTACCCTACTGTAAGCAAGATTGTAAGAC 5198 || || ||||| | | ||||| |||||| | || |||||||| |||||||| ||||| Sbjct 1350 AGCTGAATTTAAAGAATATAACCCATTAATGCTGCCTTACTGTAAACAAGATTGCAAGAC 1291 Query 5199 TAATGCTAAGGCTTTTGTAGAAATATTTAAAGAGTTCTTAAACCACAATTGGGGCGACTC 5258 |||||||| |||||| || ||| | |||||||| | ||| ||||||| ||||| Sbjct 1290 AAATGCTAAAGCTTTTAAAGCTATAATGAAAGAGTTTACTGATCACGATTGGGGAGACTC 1231 Query 5259 TATACAAAAGGAGCATAAACTATCTGATTTGGCTGCCAGAAGAGAACTGTTAGGGTTTGA 5318 || | || ||||| || | || || ||| ||||||||| ||||| ||| | Sbjct 1230 AATTAGATTAGAACATAAGCTTGCGGACTTATCTGTTAGAAGAGAAAGTTTAGGATTTAA 1171 Query 5319 CTTTGATAAACCTTTAGCAGAAAAATGTTTTGCAGAGTTAAATGGTATTTTAGATGACCT 5378 ||||| ||| |||||| | |||||||| || |||||| | ||| | || || Sbjct 1170 ATTTGACAAAGAATTAGCAAATAAATGTTTAAAGGAATTAAATACAAAATTACAAGAACT 1111 Query 5379 GGCAAATAAGGTTGAGCCCTTAATTCCTCCAAAACCTTTAAATAAGACAGAGTTAAAGTA 5438 |||| |||| || || || ||||| || || |||||||||||| | || || ||||| || Sbjct 1110 GGCAGATAAAGTAGAACCTTTAATACCACCTAAACCTTTAAATCAAACTGAATTAAATTA 1051 Query 5439 CTGGACTCCTCCTAAAACACAGGTCAAAAAAGATAAAAGTTTATCCGTTCATATGATAAA 5498 |||||| || |||||||| || | || ||| | | |||| ||| ||| |||| Sbjct 1050 CTGGACACCGCCTAAAACTCAACTGAAGAAAAACGGAGATTTAGGAACTCACATGGTAAA 991 Query 5499 CTTTCTAGCTAAAATAGGGGCTACCTGTGAAGATGATTACTTTGTATTTGAAAACAAGAA 5558 |||| || || || || || || ||| |||||||| || ||||||||| | || Sbjct 990 CTTTTTATCTCGTATTGGAGCAACTTGTAAAGATGATGGTTTCGTATTTGAAGATAAATT 931 Query 5559 GTACCCAATTCCATATACAGACCCTCTTAAGGAAACTCTTAAGGCAGAGATGAAGGATAT 5618 || || || || ||| | | ||| | ||||| | | ||||| ||||| || | Sbjct 930 TTATCCTATACCTTATGAAAAACCTTTAAAGGAGTCAGTACGAGCAGAAATGAAAGACTT 871 Query 5619 GGATCACATCAAAATGCACCTAATTAGTTTAGGATGGGACCCTGTTGAATGGTCTGAAAG 5678 || || |||||||||||| |||||||||| || ||||| || |||||||||| ||||| Sbjct 870 TGACCATATCAAAATGCACTTAATTAGTTTTGGGTGGGATCCAATTGAATGGTCAGAAAG 811 Query 5679 GGATATTACTAAGGATTCTAAGAAAAAGATACTACCTATTGTAAAACGTCAAGAAGTGCT 5738 ||||| || || |||||||| || || | || || ||| |||| | |||| ||| || Sbjct 810 AGATATGACAAAAGATTCTAAAAAGAAAAATTTATCTTTTGAAAAAAGACAAGCAGTACT 751 Query 5739 AGATAGATGGTGGGCTGAGACCGAAGAA-GGTAAATACACTAAGCATAGGTTGGAAGGAG 5797 ||||||||||||| || | | | ||| |||||||| ||||| ||||| | |||| Sbjct 750 AGATAGATGGTGGAAAGACA-CTATGAATGGTAAATATACTAAACATAGACTTGAAG--- 695 Query 5798 CTGCTGAGAGTTTAAAAATGAACTCTAGAAATACAGTAGATGATATTCAAGCTAAATTAG 5857 || |||| | |||| || || || ||| |||| |||| | ||||||| Sbjct 694 --GCACAGAGAT--AAAAGGA-----GGAGAT-CAGAAGAT-ATAT----GATAAATTAC 650 Query 5858 AGGCAAAGATTCAAGAGAAGTGGCCAGTAAGAGTTTTCACTGCTCCTAAAATTAGAGTAG 5917 | | ||| | |||||||||||||| |||||||||| || |||||||||| | || | Sbjct 649 AAGACAAGTTACAAGAGAAGTGGCCTGTAAGAGTTTATACATCTCCTAAAATCCGTGTTG 590 Query 5918 GTGTAGAAAAAGAACTGTGCCCTAACTTATTAAAATTAGGAGAAAAGGTTGCCTTTGCTA 5977 || | ||||| || ||||||| ||| |||| | ||||| ||||||| Sbjct 589 GTATTGAAAAGGATTTGTGCCC---------AAATTTAGTNNNNNA-GTTGCGTTTGCTA 540 Query 5978 AAGACTATGCAGATTGGTTGACATATAGACATAGAAGGAACTCAATTGCTGGAGGTGATA 6037 |||||| ||| || ||||| |||||||| || ||||| || | ||||||||||||| | Sbjct 539 AAGACTTTGCCGACTGGTTAACATATAGGCACAGAAGAAATGCGATTGCTGGAGGTGTTT 480 Query 6038 CTGACGAGGATACAGGAGAACCAACTTCTGGATTCTTATCTAATTATAGAGAAGTAGATG 6097 || || ||||| || | ||| || ||| || |||||| |||||||||| |||| Sbjct 479 TAGATGAAGATACTGGTGTACCGTCTAGTGGGTTTTTATCTGCATATAGAGAAGCTGATG 420 Query 6098 GTAGAATAGGTACTCCCTCAATAGAAATTGGAGCTTCTACAAGTAGATACACGCATAAGA 6157 || || | ||||| || || ||||||||||| ||||| ||||||| ||||| | Sbjct 419 GTCGAGTGCCAACTCCATCTATTGAAATTGGAGCAAGTACAAACCGATACACTCATAAAA 360 Query 6158 ATGTTGCTAATATTCCTAGACCTAGTTCTAAGTATGGCAAAGAAATGCGTAGTATGTTTA 6217 ||| ||||||||||||||| | ||||||| ||||| || |||||||||||| | |||| Sbjct 359 TTGTAGCTAATATTCCTAGAGCAAGTTCTACTTATGGTAAGGAAATGCGTAGTTTATTTA 300 Query 6218 GAGCTGGTAAAGGGGCAGTATTTTTTGGATTTGACTTTTCTTCTTTGGAAAACAGGATTC 6277 |||| || | || ||| |||| ||||||||||| | ||||||||| || || || || | Sbjct 299 GAGCAGGAGACGGAGCAATATTCTTTGGATTTGATTATTCTTCTTTAGAGAATAGAATAC 240 Query 6278 AAGGTCACTATATTTTTAGGTACGAAGGAGGTCCAGAAATGGCTGTTGCATTGGTGGCAG 6337 |||| |||||||||| ||| |||||| ||||||||||| | | || || || | Sbjct 239 AAGGGTCTTATATTTTTAAATACCCAGGAGGACCAGAAATGGCAGAATCTTTAGTAGCTG 180 Query 6338 AAAAACCTAACGATATACATACACTTAATTCTATCAAATTAGGTATTAGTAGGACTGATG 6397 |||| ||||| |||| || | |||||| | || |||||||| || | | |||| | Sbjct 179 AAAAGCCTAATGATAGTCACTCTCTTAATGCAATTAAATTAGGAATACCTCGATCTGAAG 120 Query 6398 CAAAAAGTTTTACCTATGCTACACTTTATGGGGCAGCAGCAGGTAAAATTTCAAAGATGT 6457 || |||||| || || | || || || || || | || || ||||||| Sbjct 119 TTAAGTCTTTTACTTACGCAGTTTTATACGGAGCTGCTGCGGCAAAGATAAAAAAGATGC 60 Query 6458 TAGGTATTTCTTTAGAAGAGGCTAAAGTACTGATTGATTCTTTCTGGGATGGTAATCCT 6516 | ||| || |||| || |||||| ||| |||||| ||| ||| |||| |||||| Sbjct 59 TTGGTGTTAGTTTATCGGAAGCTAAACAACTTATTGATGATTTTTGGAATGGAAATCCT 1 Score = 174 bits (192), Expect = 1e-38 Identities = 391/582 (67%), Gaps = 43/582 (7%) Strand=Plus/Minus Query 9977 AAAGTATTGATTTTATTTTTGCTGATTTACCTTATGGGACTACTCAATGTAAGTGGGACA 10036 ||| | |||||| ||| ||||| ||||| || || | || |||||| ||||||| Sbjct 4676 AAACTGTTGATTGTATATTTGCAGATTTCCCATACGTTACGACTCAAGCCCGATGGGACA 4617 Query 10037 GTACTTTAGACTTGGTAATCTTATGGGGTCATTATAAAAGAGTCTTAAAAGATGATGG-- 10094 | |||| || | || || |||| | |||||| | |||||| | |||| Sbjct 4616 CCCCAATAGATTTAGAAAAGTTTTGGGTAGAAGCAAAAAGACTATTAAAACCTAATGGAG 4557 Query 10095 TA-TTATA-GCACTATTTGCTCAAACTCCTTTTGACAAAGTTTTAGGGGCATCTAACTTA 10152 || |||| | ||| ||||||| |||||| ||| |||||| |||||||| | Sbjct 4556 TAGTTATTTGTACT----GCTCAAATACCTTTTAACATTACTTTAGGTGCATCTAATAT- 4502 Query 10153 GAAATG-TTAAGATATGAATGGATATGGGAAAAAACTAACGCAACAGGGCATTTAAATTC 10211 |||||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||| ||||| | Sbjct 4501 GAAATGGTTAAGGTATGAATGGATTTGGGAGAAAACTAACGCTACAGGTCATCTAAATGC 4442 Query 10212 TAAAATAATGCCCATGAAAGCCCATGAGAATATTTTAGTTTTCTATAAAGATAAGCCTAG 10271 |||| ||||| | |||||| || || ||| | | |||| || | ||||| Sbjct 4441 GAAAAAGATGCCTAGGAAAGCTCACGAAAATGTAATGATTTTTTACA---ATAAG----- 4390 Query 10272 TAAAGCTAAAAATTTTAAACGTACTTATAATTTTCAGAAGACTAAAGGGCACAAACCTGC 10331 || || |||||||||| || || || | ||| || |||||||| Sbjct 4389 ------------TT----ACCTACTTATAATCCACAAAAAACAACAGGACATAAACCTGC 4346 Query 10332 TAATTTTAGAACTAAAAAAGTAGACGTTCAAAATAGAACTCAGGTATATGGAAAAACAAA 10391 |||||||||||| || |||| | | ||| | | ||||||| ||| | Sbjct 4345 TAATTTTAGAAC-AACAAAG-----GCT---AATTCTTGTGAATTATATGGTAAAGTCGA 4295 Query 10392 CAAAGAAGATACCTCTGGAGGGTATACAGATAGATTCCCTAGGAGTGTACTTAAATTTAA 10451 |||| | | || ||||||| |||||||| |||| || || || || | | ||| Sbjct 4294 AAAAGGAAACACGACTGGAGGTTATACAGACAGATATCCAAGAAGCGTGTTAATTTTTCC 4235 Query 10452 AAGTGATAAGCAAATAAGCAAGTTACACTCTACTCAAAAACCTTTAGCTTTAAATGAATA 10511 |||||| || | ||| || ||||| ||||||||| ||||| || ||| || || Sbjct 4234 TTCTGATAAACAGAAAAGTAAATTACATAGTACTCAAAAGCCTTTGGCATTATTAGAGTA 4175 Query 10512 TTTTATAAAAACATACACTAACGAAGGGGATACTGTTTTAGA 10553 |||| | || || || || || ||||||||| ||||||| Sbjct 4174 TTTTGTTAAGACTTATACAAATGAAGGGGATTTAATTTTAGA 4133 >seq218925 Length=1702 Score = 367 bits (406), Expect = 1e-96 Identities = 648/926 (70%), Gaps = 24/926 (3%) Strand=Plus/Minus Query 144718 AAAGATTTTACAAAAGAAGCTTTTTTAGAG-TTGAATAAGCTTCAAAAAGGGGAGAAGAG 144776 || || | ||| |||||||| ||| | || ||| | ||| | |||||||| || || Sbjct 1371 AAGGAATATACTAAAGAAGCATTTGTCGAAATTGGA-AAGTTGCAAAAAGGAGAAAAACT 1313 Query 144777 GTTGCCTAAAACAGGTGAGGATTTTATTGATAGTCATATAGGGTGTATTTTACCAGGAGA 144836 || || |||||||| ||||| |||||||| ||| |||| ||||| ||||||||||| Sbjct 1312 TTTACCAAAAACAGGGTTTGATTTCATTGATAGGCATTTAGGATGTATGTTACCAGGAGA 1253 Query 144837 TGTTATTCTTATCTCAGCTCTTTCTGGCCAAGGTAAGACTGAGACTCTT---CAAAGAAT 144893 |||| | ||| | ||| || || |||||| ||| || || |||| ||| Sbjct 1252 TGTTGTACTTTTAAGTTCTCCATCAGGAACAGGTAAAACT---ACAGTTGCACAAAAAAT 1196 Query 144894 GAAAAAGAAAATACTTAGTTTAACTG-TAAATCCAGATGCTGAAAATTATGTCTTTTTAG 144952 || || || ||| |||| | || | |||||||||| || || || ||||||| | | | Sbjct 1195 TAAGAAAAACATA-TTAGATAAAGAGATAAATCCAGAAGCAGATAAATATGTCTATGTTG 1137 Query 144953 ATGTGTCTTTAGAAATGAAAGTTTTCAATATCCTTTTAAGAGGTATAGCTGGAACCA-Ta 145011 || |||||||||||||||||||| ||| | ||| | |||| | | |||| | | Sbjct 1136 ATTATTCTTTAGAAATGAAAGTTTTTAATCTTCTTATGAGAGCTTCTTC-GGAATTACTT 1078 Query 145012 aaaaagaaaaaaTCTGATATTCTTTTTAAAGAATTTACAGAAGAAGAAAAAGAGGAAGTA 145071 |||||||| ||| | || || || ||||| || || || |||||||| || || || Sbjct 1077 AAAAAGAAGAAAACAGAGATACTGTTTAATGAGTTCACTGAAGAAGAGCAAATAAAAATA 1018 Query 145072 AATAAGTATTATAAAGGTGTTAATGACAAAAGGCACTACCTTTCTCA---GTCTCCTACA 145128 || |||||||| || | |||||| | || || | | ||| | | || ||| Sbjct 1017 AAAAAGTATTACGAAACATTAAATGACGATAGACAGTTTTTAAGTCAAGTGCCACCAACA 958 Query 145129 ACTGTAGACCAATTTGAAGAAAAGGTTAGGGAGTTTTTAACTGAACATAAGGACAAGGAG 145188 || ||| | ||| ||| | ||||||||||||| | |||||| || || Sbjct 957 CCTCAAGAGTTTTATGATGAA---GCAAGGGAGTTTTTAATTAAACATAGTGATAAAAGT 901 Query 145189 GCTGT-TTTTGTAGCTTTAGATCACGTATTACTTTTTAAAGGGGCTGAGAAACAGAGTTT 145247 || || |||| ||| ||| || ||||| ||| | ||||| |||| ||| | || | Sbjct 900 GCAGTCTTTTTTAGTTTT-GACCACGTTTTATTAGCAAAAGGTTCTGATAAAAAAAGAAT 842 Query 145248 GTTAGAAAAGCTTTGTGAGGCTGTTAATCAGTTGAAATTAGAGTTTTCTAACGTGTATTT 145307 ||||||| | |||||||| | ||||| || |||||||| ||| ||| || ||||| Sbjct 841 GTTAGAAGATTTTTGTGAGAAAATAAATCAATTAAAATTAGAATTTAATAATGTTTATTT 782 Query 145308 TATTTTAATTTCTCAAAATAACAGAGCTCTTGTGGGTAGGATAGCTGAAAAAAGTAACAG 145367 | |||||||||||||| || ||| || || ||||| || |||| ||| Sbjct 781 CTTCTTAATTTCTCAAAACAATAGACTAATTTATTCAAGAATAGCAGAGAAAAATAATTT 722 Query 145368 TGCGTCACCAAATGCTGGTGATGTCTTTGGAAGTAGTTTCTTAGATCAATTATGTAGCTT 145427 || |||||||| | ||||| ||||| ||||||||| || ||| | ||||| || Sbjct 721 AGCTGCACCAAATCCAACAGATGTTTTTGGGTCTAGTTTCTTGGACCAACTTTGTAGTTT 662 Query 145428 TAACATTATTCTATATGATGCTTTTAAAATGGGGATTAGTCAATACATGAAGGTTAATCC 145487 ||| || |||| ||| || |||||||| || |||| |||| |||||||| ||||| Sbjct 661 TAATATAGTTCTTTATAATCCTTTTAAAGCAGGTATTAAAGAATATATGAAGGTCAATCC 602 Query 145488 TGATAGATATGATTATCTTAGC-GAGTACTTTGGAGATGAGGATAGTAAAGGTAAAGTAA 145546 ||| |||||| |||| |||| | || | ||| |||||| ||||||||||||| ||| | Sbjct 601 TGAAAGATATCATTA-CTTATCAGACCATTTTACAGATGAAGATAGTAAAGGTAGAGTGA 543 Query 145547 GTTTTGAAACTGAA-AATAAGATCTTTGTCCATCTTATTAAAACCAGAGAGTCTGATACT 145605 ||||| | || ||| || | || |||| ||| ||||||||| ||||| |||||| Sbjct 542 GTTTTCATACAGAAGGATTA-ATATTTGCTCATTGTATTAAAACTAGAGAATCTGATCAA 484 Query 145606 CCTTATAAAGATATATTTGTAATTGA 145631 ||| ||||||| | ||| ||||| Sbjct 483 ATGTATCAAGATATTTATGTTATTGA 458 >seq55517 Length=768 Score = 311 bits (344), Expect = 8e-80 Identities = 367/493 (74%), Gaps = 13/493 (3%) Strand=Plus/Minus Query 6550 TATTGGGAATCTACTGGGAAAAAGTTTATCCTAGGTATTGATGGCCGTAAGATTATAACT 6609 ||||||||| | | || || ||| | || ||||| ||||| ||||| || | |||| Sbjct 768 TATTGGGAAAGCAAAGACAAGAAATTTGTACTTGGTATAGATGGACGTAAAATCAGAACT 709 Query 6610 AGAAGTAAACACTCTTTAATTAATGCTTTGTTTCAAAGTGGAGGGGTAATATTTGCTAAG 6669 |||||||| ||| |||| | ||||| || |||||||||||||| ||||||||||| ||| Sbjct 708 AGAAGTAAGCACAGTTTATTGAATGCCTTATTTCAAAGTGGAGGAGTAATATTTGCAAAG 649 Query 6670 TATGTTACTGTAATTTTGATGGAAAAAATGGAACAGGCAGGATTTTGTATTGACCCTTTA 6729 ||||| | ||| ||||||| | | |||||||| |||| | |||||||| ||||| Sbjct 648 TATGTAAGTGTTTATTTGATGCAGATGATGGAACAAAAAGGACTGTGTATTGATCCTTTT 589 Query 6730 AAAGGGAAGCCAGACGTTTGTTCTATGATTGAATACCATGATGAGCAAGATATGTATGCT 6789 | || ||||| || ||||||||||||||||||| ||||| || ||||||||||||||| Sbjct 588 ATTGGAAAGCCTGATATTTGTTCTATGATTGAATATCATGACGAACAAGATATGTATGCT 529 Query 6790 ACACCTAAACTATTCAAGTTTGAAGTGTTTGAGACAAAAGATGAGGCTAAAGAGTTTGCT 6849 | ||||||||||| || ||| |||||||| | | |||| || |||||||| |||| | Sbjct 528 AATCCTAAACTATTTAAATTTCAAGTGTTTAATAGTGAAGAAGAAGCTAAAGAATTTGTT 469 Query 6850 AAGAACTGGGAAGGTAGGCAGTTAGGGGCTATCTCTGAAGGTAAA---GGTAAGTTTTTT 6906 || || ||| || | || ||| | || | || ||||||||| || || | |||| Sbjct 468 AAAAATTGGACTGGCGGACAATTAAGTGCAGTTTCAGAAGGTAAAAATGGAAAATATTTT 409 Query 6907 ATAACCTTGCC--TAGTGATTTGTCTATAGCAGTCGAAGACTCTATAACAGAAGT---AG 6961 || | ||||| |||| || ||| || | ||||| ||||| | | || || Sbjct 408 GTATCTTTGCCAGGAGTGGTT--TCTGAAGGTATTGAAGAATCTATGAAAATCGTTAGAG 351 Query 6962 CTCAACTACTTAAAATAAAAGTAGAAATGGGATTTGAATACATGGTAGGTAAAAATTGGT 7021 | || || ||||| | ||||| |||||||||||||| ||| |||| || || |||| Sbjct 350 ATAAATTA---AAAATCAGCGTAGACATGGGATTTGAATATATGTTAGGAAATAACTGGT 294 Query 7022 ATGAATGCCATTA 7034 ||||||| ||||| Sbjct 293 ATGAATGTCATTA 281 >seq91464 Length=1688 Score = 187 bits (206), Expect = 2e-42 Identities = 258/359 (72%), Gaps = 4/359 (1%) Strand=Plus/Minus Query 84672 TTTGTACATTCTTATTTTTTATATGTTCCTACTATTTGCCTTGACTCTCTTTCTCTTTGT 84731 ||||| |||||||| |||||||| ||||| ||| | | ||| |||||||||||||| Sbjct 466 TTTGTTCATTCTTACTTTTTATAGGTTCCCCCTACATTTCGTGATTCTCTTTCTCTTTGA 407 Query 84732 CTTTCCTCCATCCAATGTAAAGCTTCTTGTAACTTTGTTATGGCCGTAGCACTTTCTCTT 84791 | ||| |||||||||||||| ||||||| ||| || ||||| || | || | |||||| Sbjct 406 CGTTCTTCCATCCAATGTAACGCTTCTTCTAATTTAGTTATAGCAATTGCTCCCTCTCTT 347 Query 84792 GAAGGAACTAAAGAGTTTTTAAACTTTAAGTCCTCAATCATCATTGAAAGTAAGGTCTCA 84851 ||||||||||| | |||||||||||| || |||||||| || | ||| || || Sbjct 346 CCTGGAACTAAAGACTGTTTAAACTTTAAATCAGATATCATCATAGACAATAAAGTTTCG 287 Query 84852 TGAAGAATACCATCTACTTTGTCTACTGCCTCTTCTTTTAACCTAGATCCTCTTACAAAT 84911 || | || || || ||| |||||| |||| ||| | ||| | || |||||||||||| Sbjct 286 TGTAAAACGCCTTCACGTTTTTCTACTTCCTCGTCTCTCAACTTTGAGCCTCTTACAAAT 227 Query 84912 CTAATAACTTGAGATACTCCAGGAACTTCTTGAATACCTTTTCCTTCTACTATTGTCCAT 84971 || |||| | ||| | || || ||| |||||||| || || | ||| Sbjct 226 TGTATCTCTTGGTAGTTTCCTG---TTTGTTCAATTCCTTTTCCGTCAACAACCTCCCAC 170 Query 84972 ATAGGAAGCTCATAATGAGTTCCTACCTCTACTGTTTTAAATTCTCTTTTACTCATCTT 85030 | || | || | ||| || | |||||||||||||| |||||||||||| || Sbjct 169 CTTGGTAATTCGT-ATGTTGCCCCTCTTCTACTGTTTTAAAAATTCTTTTACTCATTTT 112 >seq55513 Length=14626 Score = 105 bits (116), Expect = 6e-18 Identities = 194/280 (69%), Gaps = 12/280 (4%) Strand=Plus/Plus Query 19291 TTTTGTAACACAAAACCTTATCCCTCTTAATATTCTTAAAGGATCTTCTTTAAAAGATAT 19350 ||| |||| | |||| || || | | ||| ||||||||||| || || ||||||||| Sbjct 12520 TTTGGTAATAGAAAATCTCATTGCACGTAAAATTCTTAAAGGGTCGTCATTAAAAGATGC 12579 Query 19351 CATAGGATCATTTGGAGTATGTAATACCTTATAGTGTAGGTGCCTTTTTCCATTAAATAA 19410 | ||| ||||||| ||||| |||| |||| | ||| ||| | |||||| Sbjct 12580 TGCTGTATCTATTGGAGTTCTTAATATTTTATTCTGTAAATCTTTTTGTCCGTCAAATAA 12639 Query 19411 ATCTATTATTTCTCCAGACTC---ATCTTTTGCCATTGCATTTACTGTGAAATCTCTTCT 19467 ||||| || | || ||| |||||| ||||||||||||||||| |||||||||| Sbjct 12640 ATCTACAATGTTACC---CTCGATATCTTTAGCCATTGCATTTACTGTAAAATCTCTTCG 12696 Query 19468 TACTAAATCATCATATAGTTCTCCTAATTCTGATACTGGGGCTCTGCTGTTTTCTAAATA 19527 | |||||| || || | |||||| | | ||| ||| ||| | ||| Sbjct 12697 CAATAAATCGTCCCTTAATGTCCCTAATACAACTTTTGGTTGTCT--AGTTCCTTTAAT- 12753 Query 19528 GTAA---AGCTCTTTTCTTGCTAACACAAAATCAGCATCT 19564 |||| | ||||||||| |||| |||||||| |||||| Sbjct 12754 GTAACCTAACTCTTTTCTAGCTAGTACAAAATCTGCATCT 12793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 464956502872000