Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_023007.1 Length=168876 Score E Sequences producing significant alignments: (Bits) Value seq212486 84.2 2e-11 >seq212486 Length=688 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 61868 ACTGATGCAGACGTTGACGGATTTCACATTCGAACACTTATCTTAACTATGATTTACCGT 61927 || ||||| || |||||||| | || ||||||||| | | || || | |||| || Sbjct 100 ACGGATGCTGATGTTGACGGTTCACATATTCGAACATTATTATTGACATTCTTTTATCGC 159 Query 61928 CTAATGCCTACGTTAATTGAAGAAGGATATATCTACATAGCTGAATCACCATTATATGAA 61987 | |||||| |||||||||| ||||||||||||| || || || | ||||||||| || Sbjct 160 CAAATGCCGGAGTTAATTGAAAAAGGATATATCTATATTGCACAACCCCCATTATATAAA 219 Query 61988 ATTACACAA 61996 | ||||| Sbjct 220 CTCGCACAA 228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538326049160960