Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq264433 84.2 6e-12 >seq264433 Length=1736 Score = 84.2 bits (92), Expect = 6e-12 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 21035 GTTATCAGAAATCCACTTATTACAAAGAAAACATCAACTCCAACAAATCCTCCAGAGAAT 21094 ||||||| ||| ||||| || ||||||||||||||||| |||||||| || ||||| ||| Sbjct 599 GTTATCAAAAAACCACTAATGACAAAGAAAACATCAACACCAACAAAACCGCCAGAAAAT 540 Query 21095 GACTTAA-ATCCGGCATGAAAAAGAATGACCGACAAAACTGCAATAGCGCGGAGTCCGTC 21153 | ||| ||| | |||||| | || || || |||||||| || | | || || Sbjct 539 AGCGTAATATCAAG-ATGAAACATAAGCACGCTAAATACTGCAATTGCTCTTAAGCCATC 481 Query 21154 TATCTCTGGTCGATA 21168 ||| ||||| || || Sbjct 480 TATATCTGGACGGTA 466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145139251327104