Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq244135 87.8 4e-12 >seq244135 Length=507 Score = 87.8 bits (96), Expect = 4e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 113016 GCACCAATGCCTACAGCTTCGACTGCACAGATTCTCGGTAATAATGAATGTTTCGAGCCA 113075 ||||| |||||||||||||| || |||||||| | || ||||||||| ||| ||||| Sbjct 161 GCACCTATGCCTACAGCTTCTACATCACAGATTTTAGGAAATAATGAAGCTTTTGAGCCG 220 Query 113076 ATTACAAGTAATATTTATGTCCGACGTGTTCTAGCAGGTGAGTTTGTACTTTGTAATAAA 113135 ||| |||||||||| ||| ||||| || |||| || ||| | || || ||| Sbjct 221 TATACCTCTAATATTTATACCCGTCGTGTACTTTCAGGAGAATTTATTGTTGTAAACAAA 280 Query 113136 TATCTGCAAGAAGAACTT 113153 |||| | ||||| ||| Sbjct 281 CATCTTCTGGAAGATCTT 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1182424093847976