Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq209393 322 1e-82 seq11950 181 3e-40 seq78081 136 1e-26 seq209394 134 4e-26 seq271769 109 2e-18 seq275687 96.9 1e-14 seq208853 95.1 4e-14 >seq209393 Length=1576 Score = 322 bits (356), Expect = 1e-82 Identities = 719/1065 (68%), Gaps = 26/1065 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || ||||||||||| || ||||| || ||||| | || | || ||| Sbjct 524 GCTATCGGGATCGATTTAGGAACGACTTACTCCTGTGTGGGAGTATTTCAGCATGGAAAA 583 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| ||||| || |||||||| || |||| ||||| || || || || ||||| Sbjct 584 GTGGAAATCATTGCCAACGATCAAGGGAATCGAACGACGCCGTCTTATGTCGCTTTTACA 643 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || |||| | | || || ||| | || || ||||||| |||| ||||||| ||| Sbjct 644 GACACTGCAAGACTTATAGGAGATGCAGCCAAGAATCAAGTTGCTCTGAATCCAAGTAAT 703 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATC---TACACAA 349435 || || |||||||| || |||| ||||| ||| || | ||| || | | |||| Sbjct 704 ACCGTCTTTGATGCCAAAAGACTGATTGGCAGACAATTCTACGACGAAACCGTTTCACAG 763 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 || ||| |||| || || |||| || | || | || |||| || Sbjct 764 ---GACAAAAAGCATTGGCCATTCTAAGTTGAG---AACGTTGGGGGCAAGCCAAGAATC 817 Query 349496 GAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 | || || || ||| |||| ||||| || ||| || |||||||| || | ||||| Sbjct 818 AATGTCGAGTACAAATGTGAGACAAAGTCA-TTTACGCCAGAAGAAATCTCTGCCATGGT 876 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAAC--AGTAACTGATGCT 349612 | ||||||||||||||| ||| | | ||| | | ||| | || | ||||| Sbjct 877 ACTGAGTAAAATGAAGGAAATAGCTCAGGAATACCTCG--GAACCGAGGTCAGAGATGCC 934 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 ||| | ||||| || ||||| ||||| || | ||||| ||||| || || ||||| Sbjct 935 GTTGTCACTGTTCCCGCCTACTTTAACGACTCTCAGCGGCAGGCAACGAAGGACGCTGGA 994 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 ||| || ||| | || || || | || || ||||| |||||||| || ||||| || Sbjct 995 CACATAGCAGGGCTTAACGTACTTCGCATCATCAATGAGCCCACTGCGGCCGCAATAGCC 1054 Query 349733 TATGGGCTTGATAA-AATGAGTG-ACCA-AGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 |||||||| || || || | || ||| ||||| || |||| |||||||| | || Sbjct 1055 TATGGGCTCGACAAGAAAAAATGCTCCAGAGAAAGCAACGTTCTCATTTTTGACCTTGGA 1114 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 || || || || ||||| || | | || ||||||| || ||||||| |||||| | Sbjct 1115 GGAGGGACATTCGATGTGTCCGTTTTGTCAATTGAAGACGGCGTTTTTGAGGTTAAATCC 1174 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 |||||||| || ||||| ||||| || ||||| ||||| || | || || |||||| Sbjct 1175 ACTGCTGGGGACACACACCTTGGAGGTGAAGACTTTGACAACAGACTTGTGGACCATTTT 1234 Query 349910 GTTAAAGAATT--TAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGC 349967 || ||||| ||| | | ||| || ||| | ||| | ||||| | | Sbjct 1235 GTATCCGAATTCAGAAGGAAAATGGGCAAA--GACATTTCTAAGAATGCGAGAGCTTTAC 1292 Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCT 350027 | | ||| ||||||| ||||| || || ||||| | | ||| || | ||||| | Sbjct 1293 GAAGACTACGAACTGCATGTGAGCGAGCCAAGCGAACGCTCTCAGCTTCCGCCCAAGCGA 1352 Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087 ||| |||||||| ||| | ||| |||| || |||| | ||| || | ||| Sbjct 1353 GTATCGAAATTGACTCTTTATTTGAGGGCACTGACTTCTACACCAGTATCACGAGGGCTA 1412 Query 350088 GGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147 | |||||||| ||||| |||| | |||| | ||| | || || ||||| || | | Sbjct 1413 GATTTGAAGAGCTATGTTCGGATTTATTTAAGGGAACTCTTGAGCCCGTGGAGAAGGCTT 1472 Query 350148 TAAAAGATGCAAAAATGTCCAAAAATCAG--ATTGATGAAGTAGTTTTAGTTGGTGGTTC 350205 | | ||||| |||||| | ||||| | ||| ||||| |||| | ||||| || || Sbjct 1473 TGAGGGATGCTAAAATG--GATAAATCCGCCATTCATGAACTAGTACTCGTTGGAGGATC 1530 Query 350206 TACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAA 350250 ||| || || || ||||||||| || | ||| ||| || || || Sbjct 1531 TACTCGAATCCCCAAAGTTCAAAAGCTTCTAATTGATTTCTTCAA 1575 Score = 163 bits (180), Expect = 9e-35 Identities = 309/452 (68%), Gaps = 2/452 (0%) Strand=Plus/Minus Query 183341 TTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATTACTTTT 183400 ||||| ||| || |||| ||| || || || || | ||||| ||||| || ||| Sbjct 1552 TTGAACTTTGGGGATTCGAGTAGATCCTCCAACGAGTACTAGTTCATGAATGGCGGATTT 1493 Query 183401 ACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATC 183460 | |||| | ||| | ||| | || || || || || | |||| |||||||||| Sbjct 1492 ATCCATTTTAGCATCCCTCAAAGCCTTCTCCACGGGCTCAAGAGTTCCCTTAAATAAATC 1433 Query 183461 TATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATA 183520 ||||| |||||| ||||| || || || | | | | |||||| | || | | | Sbjct 1432 CGAACATAGCTCTTCAAATCTAGCCCTCGTGATACTGGTGTAGAAGTCAGTGCCCTCAAA 1373 Query 183521 TAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTC 183580 ||| || |||||||| || | ||| | || | ||| | |||| || ||||| || Sbjct 1372 TAAAGAGTCAATTTCGATACTCGCTTGGGCGGAAGCTGAGAGCGTTCGCTTGGCTCGCTC 1313 Query 183581 ACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATATCTT-GTTTATGTT 183639 |||||| |||| ||||| ||||| | ||| | ||| | | ||| |||| | || || Sbjct 1312 ACATGCAGTTCGTAGTCTTCGTAAAGCTCTCGCATTCTTAGAAATGTCTTTGCCCAT-TT 1254 Query 183640 TTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTA 183699 | ||| | ||||| | | |||||| | | | ||| | ||||| |||||||| || | Sbjct 1253 TCCTTCTGAATTCGGATACAAAATGGTCCACAAGTCTGTTGTCAAAGTCTTCACCTCCAA 1194 Query 183700 AATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTG 183759 ||||| || |||||||| | |||||| ||||| | ||||||||||| |||| | Sbjct 1193 GGTGTGTGTCCCCAGCAGTGGATTTAACCTCAAAAACGCCGTCTTCAATTGACAAAACGG 1134 Query 183760 ATACATCAAATGTACCACCACCCAAATCAAAA 183791 | ||||| ||||| || || || | |||||| Sbjct 1133 ACACATCGAATGTCCCTCCTCCAAGGTCAAAA 1102 >seq11950 Length=2906 Score = 181 bits (200), Expect = 3e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| | ||| | ||| |||||||||||||| || || || || || ||||| ||||| Sbjct 1100 AGAACTAAATGCAAAGTGGACTCTTTTTGAATGTTGTAGTCCGACAAGGTTCGGCCATCC 1041 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 |||||||| || ||||| ||||| | ||| ||||| || || ||||||||||| || || Sbjct 1040 TCAAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCT 981 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| |||| || ||||| ||||| | || ||||| ||||| ||||| || | ||| Sbjct 980 TGAATCTTAGTCTTCACATTTTCAATGGTGTCGGATGGCTCAACCTCAAGAGTGATGGTC 921 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || ||||| || ||||| ||||| ||||||||| Sbjct 920 TTCCCGGTAAGAGTTTTAACAAAGATCTGCATT 888 Score = 178 bits (196), Expect = 4e-39 Identities = 181/236 (77%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| || ||||| | || ||||| |||||||| || || || |||||||| || | Sbjct 439 TTTGCATTCCTCCACGAAGCCTAAGAACGAGATGAAGGGTGGATTCCTTTTGAATGTTGT 380 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || |||||||||||||| ||||| |||||||| ||||| || |||| Sbjct 379 AATCGGAGAGAGTACGGCCATCTTCAAGTTGCTTTCCGGCAAAGATGAGACGCTGTTGAT 320 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || ||||||||||||||||| || || || || || || ||||| | || || | Sbjct 319 CTGGGGGGATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCTGAGG 260 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| || ||||| | ||| || || ||||| || || || || || |||||| Sbjct 259 CCTCAACCTCTAGTGTGATTGTTTTGCCAGTTAGAGTCTTGACGAAGATTTGCATT 204 Score = 168 bits (186), Expect = 2e-36 Identities = 164/211 (78%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | || || ||||||||||| || || || || |||||||| | Sbjct 211 TTTGCATTCCACCTCGAAGCCTAAGGACAAGATGAAGGGTCGATTCCTTCTGAATATTGT 152 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || |||||||| |||||||||||||||||||| ||||| ||||| | Sbjct 151 AGTCGGAAAGAGTACGACCATCTTCCAGTTGTTTTCCAGCAAAGATAAGACGCTGCTGGT 92 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || |||||||| || || || || || || || ||||| ||||||| |||||||| Sbjct 91 CTGGGGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATCGTATCAGATG 32 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || || || || | |||||||| || Sbjct 31 GCTCGACCTCGAGAGTGATGGTCTTTCCAGT 1 Score = 168 bits (186), Expect = 2e-36 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | || || ||||||||||| ||||| || ||||||||||||| Sbjct 667 TTTGCATTCCACCTCGGAGCCTAAGGACAAGATGAAGGGTAGATTCCTTTTGAATATTAT 608 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| | || || || || || || || || ||||| || || ||||| ||||||| Sbjct 607 AATCAGACAGGGTGCGACCGTCCTCTAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGAT 548 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || |||||||| || || || ||||| ||||| || || || ||||| | || || | Sbjct 547 CTGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACGTTCTCAATGGTGTCTGAGG 488 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| || ||||| | ||| || || ||||| || || || || || |||||| Sbjct 487 CCTCAACCTCTAGTGTGATTGTTTTGCCAGTTAGAGTCTTGACGAAGATTTGCATT 432 Score = 167 bits (184), Expect = 7e-36 Identities = 176/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || || | ||||| ||||| | |||||||||||||| |||||||| ||||| || Sbjct 891 CATTCCTCCTCTCAATCTCAGAACCAAGTGAAGAGTAGACTCCTTTTGAATGTTATAGTC 832 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || ||||| || || ||||| |||||||| || Sbjct 831 GGACAGGGTGCGACCGTCCTCTAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCTGG 772 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||| || || || ||||| ||||| || || || ||||| | || || | || Sbjct 771 GGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACGTTCTCAATGGTGTCTGAGGCCTC 712 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||||||| || | |||||||| || || || || |||||||| |||||| Sbjct 711 AACTTCAAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACAAAAATTTGCATT 660 Score = 149 bits (164), Expect = 2e-30 Identities = 161/212 (76%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 140527 GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTT 140586 || |||| ||||| || || || || || || || || || || | || || ||||| | Sbjct 1326 GACCAAG-TGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCT 1268 Query 140587 CAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCT 140646 | ||||| ||||| || ||||| | ||| |||||||| || |||||||||||||| |||| Sbjct 1267 CGAGTTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATTCCTTCTTTGTCCT 1208 Query 140647 GAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCT 140706 | || || | || ||||| ||||| | |||||||| ||||| ||||| |||| || | Sbjct 1207 GGATCTTGGTCTTGACATTTTCAATAGTGTCAGATGGCTCAACCTCAAGAGTAATGGTTT 1148 Query 140707 TTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || || || || |||||||||||| Sbjct 1147 TGCCAGTGAGGGTCTTGACGAAAATCTGCATT 1116 >seq78081 Length=4256 Score = 136 bits (150), Expect = 1e-26 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||||||||| || || || || | ||||| ||||| || || || ||||| ||||||| Sbjct 2975 CTTTTTGAATGTTGTAGTCCGAAAGGGTTCGTCCATCCTCGAGCTGCTTTCCGGCAAAGA 3034 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTAT 140667 | | ||| || ||||| ||||| ||||| || ||||| || ||||| | || ||||| | Sbjct 3035 TCAAACGCTGTTGATCTGGAGGGATTCCCTCCTTATCTTGGATTTTGGTCTTAACATTTT 3094 Query 140668 CAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 | || | |||||| || ||||| || || |||| || || || || || || || || | Sbjct 3095 CGATGGTATCAGAGGGCTCAACCTCGAGGGTAATGGTTTTACCCGTGAGGGTCTTAACGA 3154 Query 140728 AAATCTGCAT 140737 |||||||||| Sbjct 3155 AAATCTGCAT 3164 >seq209394 Length=1434 Score = 134 bits (148), Expect = 4e-26 Identities = 284/418 (68%), Gaps = 7/418 (2%) Strand=Plus/Plus Query 350364 TACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTC 350423 |||| |||||| |||| ||||| || ||| | ||||| | || | || |||||| | Sbjct 75 TACTGGATGTAGCTCCGCTTTCTCTCGGAATTGAAACGGCAGGAGGCGTCATGACTTCAC 134 Query 350424 TTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAG 350483 | || ||||| | || | || |||||| || ||| || | || | ||| Sbjct 135 TCATCAAGAGAAACACAACGATCCCAACAAAACAGAAGCAAGTCTTCACCACTTACTCAG 194 Query 350484 ATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATA 350543 ||||||| || || || || ||||| || || ||||| || | | || ||||||| Sbjct 195 ATAATCAACCTGCAGTGACCATTCAGGTCTTCGAAGGGGAGAGACCCATGACCAAAGATA 254 Query 350544 ATAATAAACTTGGAGA-ATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCT 350602 || || ||| | || |||| || | || ||| || || ||||||||||| ||| Sbjct 255 ATCATTG-CTTAGGGAGATTTGATCTGAATGGAATCCCTCCGGCACCTAGAGGAGTGCCT 313 Query 350603 CAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAA 350662 ||||| ||||| ||||||| |||||| | || || ||| ||||||| | |||| || Sbjct 314 CAGATCGAAGTGACTTTCGACATTGATGCCAACGGGATTCTAAATGTCAGTGCAGCAGAC 373 Query 350663 AAATCAAGTGGTAAAAGTAG-TAAGGTAGAAATTACTAATGATAAATCTAGACTTTCAAA 350721 || ||| ||| |||| || || | ||||| ||||||||| | || ||||| Sbjct 374 AAGTCATCAGGT-AAAGAAGAAAAAATCACGATTACCAATGATAAAGGACGCCTCTCAAA 432 Query 350722 AGAAGATATTGAGAAAATGACACAAGATGCCGAATCATATGCTAAGGAAGATGAAGAA 350779 || || || ||||||||| |||||||| || ||| ||||| ||| || ||| Sbjct 433 GGAGGAAATAGAGAAAATGGTCCAAGATGCTGATAAATA---TAAGGCAGAGGACGAA 487 >seq271769 Length=1390 Score = 109 bits (120), Expect = 2e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || || || || || || || | || || ||||| ||||| || || ||||| ||||| Sbjct 848 TTCTGGATGTTGTAGTCGGAGAGGGTCCGTCCATCCTCAAGCTGCTTGCCAGCGAAGATC 789 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 | ||| |||||||| || ||||||||||| |||||||| || || | || || || || Sbjct 788 AAACGCTGCTGATCTGGGGGAATTCCTTCCTTATCCTGGATCTTGGTCTTCACGTTCTCG 729 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || | ||| || || || || ||||| || | ||||| || || || || || || || Sbjct 728 ATGGTATCGGAGGGCTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 669 Query 140730 ATCTGCAT 140737 || ||||| Sbjct 668 ATTTGCAT 661 >seq275687 Length=1446 Score = 96.9 bits (106), Expect = 1e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||||| ||| ||||||| ||| | ||||| ||||| || || ||||| || || Sbjct 1209 AAGATGAAGCAAACCGCTGAAGAGTATCTGGGTGACACAGTGACCGAAGCTGTCATCACG 1268 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 ||||| || ||||||||||| | ||||| || || ||||| || || | || || Sbjct 1269 GTACCTGCGTATTTTAATGACTCTCAGCGCCAGGCGACTAAAGACGCAGGTCGAATCGCA 1328 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 || || | || |||| |||||||| || |||||||| || ||||||| || Sbjct 1329 GGTTTGGAAGTGAAGCGAATCATTAATGAGCCAACTGCTGCGGCCCTTGCATACGG 1384 >seq208853 Length=5299 Score = 95.1 bits (104), Expect = 4e-14 Identities = 120/162 (74%), Gaps = 5/162 (3%) Strand=Plus/Plus Query 377422 TTTGGATTTTCAGATAATGATAAT-ATTTCTTCAATGCGTGGCACACCACGTGTAACATT 377480 ||||| || | || ||| |||| ||||| | | ||| ||||| || |||| || || Sbjct 3325 TTTGGTTTCTTGGA-AATATTAATGATTTCCTTGAGGCGAGGCACTCCCAGTGTTACGTT 3383 Query 377481 CGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTC 377540 ||| || | ||||||||||||||| || || || || || | |||||| | |||||| Sbjct 3384 ---TTTGGAGGAAACACCAGCAAAGTGAAAGGTGTTGAGGGTCATTTGAGTGGCGGGCTC 3440 Query 377541 ACCAATTGACTGCGCTGCAATAACGCCAACCATTTCTCCAGG 377582 ||||| ||||| || || || ||||||||||||| || || Sbjct 3441 TCCAATGGACTGTGCAGCCATGGCGCCAACCATTTCCCCGGG 3482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509651152118648