Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq14253 87.8 2e-12 >seq14253 Length=16169 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 139407 AAATGAGCCATTCAATTCTGGGTCGTTAATGAAACCTTTCCAACCTACAGTTGTTCTTGG 139466 ||| || |||| || || ||||| ||||| ||||||||||| || ||||||||||| Sbjct 15126 AAAAGAATCATTTAAATCAGGGTCATTAATAAAACCTTTCCAGCCAGTGGTTGTTCTTGG 15185 Query 139467 TTTCTCAAAATAAACACGCATAACCAAA 139494 ||| ||||||||||| |||||||| ||| Sbjct 15186 TTTTTCAAAATAAACTCGCATAACTAAA 15213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566279237302080