Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq14253 93.3 4e-14 >seq14253 Length=16169 Score = 93.3 bits (102), Expect = 4e-14 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 129344 TTAACCCTTCATCAATATTAAAAGAACCATTTAATTCTGGGTCGTTGACTAGGCCTTTCC 129403 |||| |||| | | |||||||||| ||||||| || ||||| || | | ||||||| Sbjct 15107 TTAAGCCTTTAGTTACATTAAAAGAATCATTTAAATCAGGGTCATTAATAAAACCTTTCC 15166 Query 129404 AACCTACAGTTGTGCGTGGTTTTTCAAAATAAACCCGCATAAC-CAATAGATATTTGTCA 129462 | || ||||| | |||||||||||||||||| |||||||| |||| || ||| ||| Sbjct 15167 AGCCAGTGGTTGTTCTTGGTTTTTCAAAATAAACTCGCATAACTAAATAAAT-TTTCTCA 15225 Query 129463 GAAAC 129467 ||||| Sbjct 15226 GAAAC 15230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516367157096640