Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_028980.1 Length=62181 Score E Sequences producing significant alignments: (Bits) Value seq214504 109 2e-19 >seq214504 Length=2501 Score = 109 bits (120), Expect = 2e-19 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 33093 GATCATGCGCGGGACCTGGGACTGGGCGGAGCCTGGGGTGCTGTTCATCGACGCGATCAA 33152 ||||||||||| ||| | || | || || || || ||| | ||||||||| ||||| Sbjct 1241 GATCATGCGCGCGACATATGATTATGCCGAACCAGGTGTGATTTTCATCGACCGTATCAA 1300 Query 33153 CCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGCCACCAACCCCTGCGGTGAGCA 33212 | | ||||||||| || ||||||| ||| || || || |||||||| || ||||| Sbjct 1301 TCAAAAGAACAACCTGCATTATTGCGAGAGCATTGCGGCAACAAACCCCTGTGGGGAGCA 1360 Query 33213 ACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTTCAACTT 33257 ||| | || || || |||||||| |||||||| || ||||||| Sbjct 1361 ACCATTGCCACCTTATGGTGCCTGTTTGTTGGGATCTATCAACTT 1405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198176052364656