Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_029091.1 Length=168771 Score E Sequences producing significant alignments: (Bits) Value seq61180 84.2 2e-11 >seq61180 Length=14870 Score = 84.2 bits (92), Expect = 2e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 50604 GTGATGCGCGTTTATTTTGAAAAGCCTCGAACTACCGTAGGTTGGAAAGGTCTTGTAAAT 50663 || ||||| ||||| ||||||||||| || ||||| || ||||||||||| || | ||| Sbjct 14445 GTTATGCGTGTTTACTTTGAAAAGCCACGTACTACAGTTGGTTGGAAAGGGCTCCTTAAT 14386 Query 50664 GATCCATATCTTGACGGAAGTTTTGATATGAACCACGGTCTTATAGTTG 50712 || || ||||| || || | || || |||||| | || |||| | ||| Sbjct 14385 GACCCTTATCTAGATGGTACTTATGCTATGAATGATGGGCTTAGAATTG 14337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537991261348160