Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq3919 80.6 6e-11 >seq3919 Length=15597 Score = 80.6 bits (88), Expect = 6e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 2854 GGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGAG 2913 ||| || ||||||||| |||||||||| ||||||||||| | ||||||||||||||| Sbjct 2321 GGGACTTTAGCTCAGTTGGTTAGAGCAACCGACTCATAATCGGTAGGTCCACGGTTCGAG 2380 Query 2914 TCCGTGTGGGCCCACCA 2930 ||||| | ||||||| Sbjct 2381 CCCGTGAAGTCCCACCA 2397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103959273466608