Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq256083 91.5 2e-13 >seq256083 Length=796 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 202548 AGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGAC 202607 ||| || || || || || ||||| || | || || || ||||| |||||| || Sbjct 598 AGATCGCACGGGTACTGGAACGCGTTCAGTTTTTGGTTATCAAATGCGCTTTGACTTGCA 657 Query 202608 CGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCT 202667 ||||| || || || | |||||||||||| | || | || |||||||| ||||| Sbjct 658 GGAAGGATTTCCGGTGCTTACCACGAAAAAGCTGCATTTAAAATCGATCATTCATGAGCT 717 Query 202668 GCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTAT 202727 | ||||||| | |||| || |||||||| || || ||| | |||| || | || Sbjct 718 GTTGTGGTTTTTACAAGGTGATACCAACATTGCCTATCTCAACAAGCACGGTGTTTCCAT 777 Query 202728 CTGGGACGAATGGGC 202742 |||||| |||||||| Sbjct 778 CTGGGATGAATGGGC 792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785475977936000